Rice molecular breeding laboratories in the genomics era: current status and future considerations

BCY Collard, CM Vera Cruz, KL McNally… - … journal of plant …, 2008 - Wiley Online Library
Using DNA markers in plant breeding with marker‐assisted selection (MAS) could greatly
improve the precision and efficiency of selection, leading to the accelerated development of …

Start codon targeted (SCoT) polymorphism: a simple, novel DNA marker technique for generating gene-targeted markers in plants

BCY Collard, DJ Mackill - Plant molecular biology reporter, 2009 - Springer
Random amplified polymorphic DNA (RAPD) markers have been used for numerous
applications in plant molecular genetics research despite having disadvantages of poor …

[PDF][PDF] 4 Marker-assisted selection as a component of conventional plant breeding

PK Gupta, J Kumar, RR Mir, A Kumar - Plant breeding reviews, 2010 - academia.edu
CMS Cytoplasmic male sterility COS Conserved orthologous set DArT Diversity array
technology eQTL Expression QTL ESTs Expressed sequence tags FM Functional markers …

Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes

Y Mizuta, Y Harushima… - Proceedings of the …, 2010 - National Acad Sciences
Genetic incompatibility is a barrier contributing to species isolation and is caused by genetic
interactions. We made a whole genome survey of two-way interacting loci acting within the …

Conserved DNA-derived polymorphism (CDDP): a simple and novel method for generating DNA markers in plants

BCY Collard, DJ Mackill - Plant Molecular Biology Reporter, 2009 - Springer
A novel method for generating plant DNA markers was developed based on data mining for
short conserved amino acid sequences in proteins and designing polymerase chain …

A broad phylogenetic survey unveils the diversity and evolution of telomeres in eukaryotes

J Fulnečková, T Ševčíková, J Fajkus… - Genome biology and …, 2013 - academic.oup.com
Telomeres, ubiquitous and essential structures of eukaryotic chromosomes, are known to
come in a variety of forms, but knowledge about their actual diversity and evolution across …

Dysfunction of Chromatin Assembly Factor 1 Induces Shortening of Telomeres and Loss of 45S rDNA in Arabidopsis thaliana

I Mozgová, P Mokroš, J Fajkus - The Plant Cell, 2010 - academic.oup.com
Abstract Chromatin Assembly Factor 1 (CAF1) is a three-subunit H3/H4 histone chaperone
responsible for replication-dependent nucleosome assembly. It is composed of CAC 1-3 in …

Development of a seed DNA-based genotyping system for marker-assisted selection in maize

S Gao, C Martinez, DJ Skinner, AF Krivanek… - Molecular …, 2008 - Springer
Leaf collection from the field, labeling and tracking back to the source plants after
genotyping are rate limiting steps in leaf DNA-based genotyping. In this study, an optimized …

[HTML][HTML] Agro-morphological, physico-chemical and molecular characterization of rice germplasm with similar names of Bangladesh

MSU Ahmed, M Khalequzzaman, MDK Bashar… - Rice science, 2016 - Elsevier
Thirty-one duplicate and similar named rice germplasms of Bangladesh were studied to
assess the genetic variation for the agro-morphological and physico-chemical traits and …

An ABC transporter is involved in the silicon-induced formation of casparian bands in the exodermis of rice

M Hinrichs, AT Fleck, E Biedermann, NS Ngo… - Frontiers in Plant …, 2017 - frontiersin.org
Silicon (Si) promotes the formation of Casparian bands (CB) in rice and reduces radial
oxygen loss (ROL). Further transcriptomic approaches revealed several candidate genes …