[HTML][HTML] Comparative phylogenomics and phylotranscriptomics provide insights into the genetic complexity of nitrogen-fixing root-nodule symbiosis

Y Zhang, Y Fu, W Xian, X Li, Y Feng, F Bu, Y Shi… - Plant …, 2024 - cell.com
Plant root-nodule symbiosis (RNS) with mutualistic nitrogen-fixing bacteria is restricted to a
single clade of angiosperms, the Nitrogen-Fixing Nodulation Clade (NFNC), and is best …

On the importance of sequence alignment inspections in plastid phylogenomics–an example from revisiting the relationships of the water‐lilies

JA Roestel, JH Wiersema, RK Jansen, T Borsch… - …, 2024 - Wiley Online Library
The water‐lily clade represents the second earliest‐diverging branch of angiosperms. Most
of its species belong to Nymphaeaceae, of which the “core Nymphaeaceae”—comprising …

Conserved cis-elements enable NODULES WITH ACTIVATED DEFENSE1 regulation by NODULE INCEPTION during nodulation

H Yu, A Xiao, Z Zou, Q Wu, L Chen, D Zhang… - The Plant …, 2024 - academic.oup.com
Symbiotic nitrogen fixation within nitrogen-fixing clade (NFC) plants is thought to have arisen
from a single gain followed by massive losses in the genomes of ancestral non-nodulating …

Identification of clade-wide putative cis-regulatory elements from conserved non-coding sequences in Cucurbitaceae genomes

H Song, Q Wang, Z Zhang, K Lin… - Horticulture Research, 2023 - academic.oup.com
Cis-regulatory elements regulate gene expression and play an essential role in the
development and physiology of organisms. Many conserved non-coding sequences (CNSs) …