Getting the most out of PubChem for virtual screening

S Kim - Expert opinion on drug discovery, 2016 - Taylor & Francis
Introduction: With the emergence of the 'big data'era, the biomedical research community
has great interest in exploiting publicly available chemical information for drug discovery …

Into the Fray! A Beginner's Guide to Medicinal Chemistry

CGL Veale - ChemMedChem, 2021 - Wiley Online Library
Modern medicinal chemistry is a complex, multidimensional discipline that operates at the
interface of the chemical and biological sciences. The medicinal chemistry contribution to …

Open source Bayesian models. 1. Application to ADME/Tox and drug discovery datasets

AM Clark, K Dole, A Coulon-Spektor… - Journal of chemical …, 2015 - ACS Publications
On the order of hundreds of absorption, distribution, metabolism, excretion, and toxicity
(ADME/Tox) models have been described in the literature in the past decade which are …

Systems biology approaches to a rational drug discovery paradigm

P Prathipati, K Mizuguchi - Current topics in medicinal chemistry, 2016 - ingentaconnect.com
Ligand-and structure-based drug design approaches complement phenotypic and target
screens, respectively, and are the two major frameworks for guiding early-stage drug …

Identification of Steroidogenic Components Derived From Gardenia jasminoides Ellis Potentially Useful for Treating Postmenopausal Syndrome

X Wang, GC Wang, J Rong, SW Wang, TB Ng… - Frontiers in …, 2018 - frontiersin.org
Estrogen-stimulating principles have been demonstrated to relieve postmenopausal
syndrome effectively. Gardenia jasminoides Ellis (GJE) is an herbal medicine possessing …

Benchmarking data sets from PubChem BioAssay data: current scenario and room for improvement

VK Tran-Nguyen, D Rognan - International Journal of Molecular Sciences, 2020 - mdpi.com
Developing realistic data sets for evaluating virtual screening methods is a task that has
been tackled by the cheminformatics community for many years. Numerous artificially …

Nature Inspired Small Molecules for Chemical Biology

K Kumar, H Waldmann - Israel Journal of Chemistry, 2019 - Wiley Online Library
Chemical biology and drug discovery are instrumental sciences to address unmet medical
needs and to gain a deeper understanding of normal and disease state biology in …

Data driven polypharmacological drug design for lung cancer: analyses for targeting ALK, MET, and EGFR

D Narayanan, OA Gani, FXE Gruber… - Journal of Cheminformatics, 2017 - Springer
Drug design of protein kinase inhibitors is now greatly enabled by thousands of publicly
available X-ray structures, extensive ligand binding data, and optimized scaffolds coming off …

Target-Based Screening for Lead Discovery

M Kesh, S Goel - CADD and Informatics in Drug Discovery, 2023 - Springer
As a result of the enormous advances in molecular biology, recombinant technology, and
genomics over the past few decades, target-based drug discovery has become the dominant …

General Strategies for Rational Design and Discovery of Multitarget Drugs

Z Wang, B Yang - Polypharmacology: Principles and Methodologies, 2022 - Springer
The first step for drug discovery and development is to choose a right or optimal strategy to
begin with. This is more so for rational design of multitarget drugs (MTDs). With the rapid …