[HTML][HTML] Toward systems-level metabolic analysis in endocrine disorders and cancer
Metabolism is a dynamic network of biochemical reactions that support systemic
homeostasis amidst changing nutritional, environmental, and physical activity factors. The …
homeostasis amidst changing nutritional, environmental, and physical activity factors. The …
Quantitative metabolic fluxes regulated by trans-omic networks
Cells change their metabolism in response to internal and external conditions by regulating
the trans-omic network, which is a global biochemical network with multiple omic layers …
the trans-omic network, which is a global biochemical network with multiple omic layers …
[HTML][HTML] Pathway bias and emergence of quasi-irreversibility in reversible reaction networks: Extension of Curtin-Hammett principle
S Takahashi, T Abe, H Sato, S Hiraoka - Chem, 2023 - cell.com
Summary The Curtin-Hammett principle, which works in a reaction sequence where slow
irreversible reactions are connected to a fast reversible reaction, determines the product …
irreversible reactions are connected to a fast reversible reaction, determines the product …
Isovitexin alleviates hepatic fibrosis by regulating miR-21-mediated PI3K/Akt signaling and glutathione metabolic pathway: Based on transcriptomics and …
Y Huang, W Luo, S Chen, H Su, W Zhu, Y Wei, Y Qiu… - Phytomedicine, 2023 - Elsevier
Background Effective drugs for the treatment of hepatic fibrosis have not yet been identified.
Isovitexin (IVT) is a promising hepatoprotective agent owing to its efficacy against acute liver …
Isovitexin (IVT) is a promising hepatoprotective agent owing to its efficacy against acute liver …
[HTML][HTML] Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity
Dysregulation of liver metabolism associated with obesity during feeding and fasting leads
to the breakdown of metabolic homeostasis. However, the underlying mechanism remains …
to the breakdown of metabolic homeostasis. However, the underlying mechanism remains …
[HTML][HTML] Comparison of hepatic responses to glucose perturbation between healthy and obese mice based on the edge type of network structures
Y Ito, S Uda, T Kokaji, A Hirayama, T Soga, Y Suzuki… - Scientific reports, 2023 - nature.com
Interactions between various molecular species in biological phenomena give rise to
numerous networks. The investigation of these networks, including their statistical and …
numerous networks. The investigation of these networks, including their statistical and …
[HTML][HTML] Bistable insulin response: The win-win solution for glycemic control
J Akhtar, Y Han, S Han, W Lin, C Cao, R Ge… - Iscience, 2022 - cell.com
To satisfy both the safety and rapidity of glycemic control, muscles' insulin response must be
bistable, as theoretically predicted. Here, we test the bistability hypothesis by combining …
bistable, as theoretically predicted. Here, we test the bistability hypothesis by combining …
[HTML][HTML] A Markov constraint to uniquely identify elementary flux mode weights in unimolecular metabolic networks
JG Chitpin, TJ Perkins - Journal of Theoretical Biology, 2023 - Elsevier
Elementary flux modes (EFMs) are minimal, steady state pathways characterizing a flux
network. Fundamentally, all steady state fluxes in a network are decomposable into a linear …
network. Fundamentally, all steady state fluxes in a network are decomposable into a linear …
Construction of an inter-organ transomic network for whole-body metabolism
Systemic metabolism is regulated by inter-organ communication at the whole-body level,
and at the intra-organ level, there are also numerous factors involved in metabolic …
and at the intra-organ level, there are also numerous factors involved in metabolic …
代謝フラックスの定量によるトランスオミクスネットワークの理解
大野聡 - 生物工学会誌, 2022 - jstage.jst.go.jp
図 1. トランスオミクスネットワーク.(A) 転写産物・酵素・反応・代謝産物の層にわたるトランス
オミックスネットワーク. 代謝フラックスは反応層のノードの大きさとして表すことができる …
オミックスネットワーク. 代謝フラックスは反応層のノードの大きさとして表すことができる …