Autophagy genes in biology and disease

H Yamamoto, S Zhang, N Mizushima - Nature Reviews Genetics, 2023 - nature.com
Macroautophagy and microautophagy are highly conserved eukaryotic cellular processes
that degrade cytoplasmic material in lysosomes. Both pathways involve characteristic …

[HTML][HTML] The different autophagy degradation pathways and neurodegeneration

A Fleming, M Bourdenx, M Fujimaki, C Karabiyik… - Neuron, 2022 - cell.com
The term autophagy encompasses different pathways that route cytoplasmic material to
lysosomes for degradation and includes macroautophagy, chaperone-mediated autophagy …

A phosphoinositide signalling pathway mediates rapid lysosomal repair

JX Tan, T Finkel - Nature, 2022 - nature.com
Lysosomal dysfunction has been increasingly linked to disease and normal ageing,.
Lysosomal membrane permeabilization (LMP), a hallmark of lysosome-related diseases …

RBG motif bridge-like lipid transport proteins: structure, functions, and open questions

M Hanna, A Guillén-Samander… - Annual Review of Cell …, 2023 - annualreviews.org
The life of eukaryotic cells requires the transport of lipids between membranes, which are
separated by the aqueous environment of the cytosol. Vesicle-mediated traffic along the …

Atg9 is a lipid scramblase that mediates autophagosomal membrane expansion

K Matoba, T Kotani, A Tsutsumi, T Tsuji, T Mori… - Nature structural & …, 2020 - nature.com
The molecular function of Atg9, the sole transmembrane protein in the autophagosome-
forming machinery, remains unknown. Atg9 colocalizes with Atg2 at the expanding edge of …

Mechanisms governing autophagosome biogenesis

H Nakatogawa - Nature reviews Molecular cell biology, 2020 - nature.com
Autophagosomes are double-membrane vesicles newly formed during autophagy to engulf
a wide range of intracellular material and transport this autophagic cargo to lysosomes (or …

Autophagy in liver diseases: a review

H Qian, X Chao, J Williams, S Fulte, T Li, L Yang… - Molecular aspects of …, 2021 - Elsevier
The liver is a highly dynamic metabolic organ that plays critical roles in plasma protein
synthesis, gluconeogenesis and glycogen storage, cholesterol metabolism and bile acid …

[HTML][HTML] ATG9A and ATG2A form a heteromeric complex essential for autophagosome formation

AR van Vliet, GN Chiduza, SL Maslen, VE Pye, D Joshi… - Molecular cell, 2022 - cell.com
Summary ATG9A and ATG2A are essential core members of the autophagy machinery.
ATG9A is a lipid scramblase that allows equilibration of lipids across a membrane bilayer …

Structure, lipid scrambling activity and role in autophagosome formation of ATG9A

S Maeda, H Yamamoto, LN Kinch, CM Garza… - Nature structural & …, 2020 - nature.com
De novo formation of the double-membrane compartment autophagosome is seeded by
small vesicles carrying membrane protein autophagy-related 9 (ATG9), the function of which …

The ATG conjugation systems in autophagy

N Mizushima - Current opinion in cell biology, 2020 - Elsevier
Autophagosome formation and maturation involve the two ubiquitin-like systems: The ATG8
and ATG12 systems. ATG8 (LC3s and gamma-aminobutyric acid receptor–associated …