SWISS-MODEL: homology modelling of protein structures and complexes
A Waterhouse, M Bertoni, S Bienert… - Nucleic acids …, 2018 - academic.oup.com
Homology modelling has matured into an important technique in structural biology,
significantly contributing to narrowing the gap between known protein sequences and …
significantly contributing to narrowing the gap between known protein sequences and …
Viral journeys on the intracellular highways
M Robinson, S Schor, R Barouch-Bentov… - Cellular and Molecular …, 2018 - Springer
Viruses are obligate intracellular pathogens that are dependent on cellular machineries for
their replication. Recent technological breakthroughs have facilitated reliable identification …
their replication. Recent technological breakthroughs have facilitated reliable identification …
Disrupting the α-synuclein-ESCRT interaction with a peptide inhibitor mitigates neurodegeneration in preclinical models of Parkinson's disease
S Nim, DM O'Hara, C Corbi-Verge… - Nature …, 2023 - nature.com
Accumulation of α-synuclein into toxic oligomers or fibrils is implicated in dopaminergic
neurodegeneration in Parkinson's disease. Here we performed a high-throughput, proteome …
neurodegeneration in Parkinson's disease. Here we performed a high-throughput, proteome …
Predicting and experimentally validating hot-spot residues at protein–protein interfaces
AA Ibarra, GJ Bartlett, Z Hegedus, S Dutt… - ACS chemical …, 2019 - ACS Publications
Protein–protein interactions (PPIs) are vital to all biological processes. These interactions
are often dynamic, sometimes transient, typically occur over large topographically shallow …
are often dynamic, sometimes transient, typically occur over large topographically shallow …
High‐throughput discovery of functional disordered regions: investigation of transactivation domains
CNJ Ravarani, TY Erkina, G De Baets… - Molecular Systems …, 2018 - embopress.org
Over 40% of proteins in any eukaryotic genome encode intrinsically disordered regions (IDR
s) that do not adopt defined tertiary structures. Certain IDR s perform critical functions, but …
s) that do not adopt defined tertiary structures. Certain IDR s perform critical functions, but …
Strategies to develop inhibitors of motif-mediated protein-protein interactions as drug leads
C Corbi-Verge, M Garton, S Nim… - Annual review of …, 2017 - annualreviews.org
Protein-protein interactions are fundamental for virtually all functions of the cell. A large
fraction of these interactions involve short peptide motifs, and there has been increased …
fraction of these interactions involve short peptide motifs, and there has been increased …
Dipeptidyl peptidase-4 stabilizes integrin α4β1 complex to promote thyroid cancer cell metastasis by activating transforming growth factor-beta signaling pathway
Q He, H Cao, Y Zhao, P Chen, N Wang, W Li, R Cui… - Thyroid, 2022 - liebertpub.com
Background: Metastatic disease is a major cause of thyroid cancer-related death. However,
the mechanisms responsible for thyroid cancer metastasis are unclear. Dipeptidyl peptidase …
the mechanisms responsible for thyroid cancer metastasis are unclear. Dipeptidyl peptidase …
Genome‑wide identification of CAMTA gene family members in rice (Oryza sativa L.) and in silico study on their versatility in respect to gene expression and …
The calmodulin-binding transcription activator (CAMTA) is a family of transcriptional factors
containing a cluster of calmodulin-binding proteins that can activate gene regulation in …
containing a cluster of calmodulin-binding proteins that can activate gene regulation in …
A bionic‐homodimerization strategy for optimizing modulators of protein–protein interactions: from statistical mechanics theory to potential clinical translation
Emerging protein–protein interaction (PPI) modulators have brought out exciting ability as
therapeutics in human diseases, but its clinical translation has been greatly hampered by …
therapeutics in human diseases, but its clinical translation has been greatly hampered by …
Molecular simulation of oncostatin M and receptor (OSM–OSMR) interaction as a potential therapeutic target for inflammatory bowel disease
Q Du, Y Qian, W Xue - Frontiers in molecular biosciences, 2020 - frontiersin.org
Therapeutics targeting cytokines such as the oncostatin M (OSM)-mediated inflammation
represent a potential strategy for the treatment of inflammatory bowel disease (IBD). Despite …
represent a potential strategy for the treatment of inflammatory bowel disease (IBD). Despite …