In search of lost small peptides

S Plaza, G Menschaert, F Payre - Annual Review of Cell and …, 2017 - annualreviews.org
A large body of evidence indicates that genome annotation pipelines have biased our view
of coding sequences because they generally undersample small proteins and peptides. The …

[HTML][HTML] C. elegans Apical Extracellular Matrices Shape Epithelia

JD Cohen, MV Sundaram - Journal of developmental biology, 2020 - mdpi.com
Apical extracellular matrices (aECMs) coat exposed surfaces of epithelia to shape
developing tissues and protect them from environmental insults. Despite their widespread …

Phenotypic robustness conferred by apparently redundant transcriptional enhancers

N Frankel, GK Davis, D Vargas, S Wang, F Payre… - Nature, 2010 - nature.com
Genes include cis-regulatory regions that contain transcriptional enhancers. Recent reports
have shown that developmental genes often possess multiple discrete enhancer modules …

Small Peptides Switch the Transcriptional Activity of Shavenbaby During Drosophila Embryogenesis

T Kondo, S Plaza, J Zanet, E Benrabah, P Valenti… - Science, 2010 - science.org
A substantial proportion of eukaryotic transcripts are considered to be noncoding RNAs
because they contain only short open reading frames (sORFs). Recent findings suggest …

[HTML][HTML] Interplay of cell shape and division orientation promotes robust morphogenesis of developing epithelia

F Xiong, W Ma, TW Hiscock, KR Mosaliganti… - Cell, 2014 - cell.com
Epithelial cells acquire functionally important shapes (eg, squamous, cuboidal, columnar)
during development. Here, we combine theory, quantitative imaging, and perturbations to …

[HTML][HTML] Insights into egg coat assembly and egg-sperm interaction from the X-ray structure of full-length ZP3

L Han, M Monne, H Okumura, T Schwend, AL Cherry… - Cell, 2010 - cell.com
ZP3, a major component of the zona pellucida (ZP) matrix coating mammalian eggs, is
essential for fertilization by acting as sperm receptor. By retaining a propeptide that contains …

Pri sORF peptides induce selective proteasome-mediated protein processing

J Zanet, E Benrabah, T Li, A Pélissier-Monier… - Science, 2015 - science.org
A wide variety of RNAs encode small open-reading-frame (smORF/sORF) peptides, but their
functions are largely unknown. Here, we show that Drosophila polished-rice (pri) sORF …

[HTML][HTML] Patterned anchorage to the apical extracellular matrix defines tissue shape in the developing appendages of Drosophila

RP Ray, A Matamoro-Vidal, PS Ribeiro, N Tapon… - Developmental cell, 2015 - cell.com
How tissues acquire their characteristic shape is a fundamental unresolved question in
biology. While genes have been characterized that control local mechanical forces to …

The proteolysis of ZP proteins is essential to control cell membrane structure and integrity of developing tracheal tubes in Drosophila

L Drees, S Schneider, D Riedel, R Schuh, M Behr - Elife, 2023 - elifesciences.org
Membrane expansion integrates multiple forces to mediate precise tube growth and network
formation. Defects lead to deformations, as found in diseases such as polycystic kidney …

SEPT12 mutations cause male infertility with defective sperm annulus

YC Kuo, YH Lin, HI Chen, YY Wang, YW Chiou… - Human …, 2012 - Wiley Online Library
Septins are members of the GTPase superfamily, which has been implicated in diverse
cellular functions including cytokinesis and morphogenesis. Septin 12 (SEPT12) is a testis …