Microfluidic systems for single DNA dynamics

DJ Mai, C Brockman, CM Schroeder - Soft matter, 2012 - pubs.rsc.org
Recent advances in microfluidics have enabled the molecular-level study of polymer
dynamics using single DNA chains. Single polymer studies based on fluorescence …

Extended-nanofluidics: fundamental technologies, unique liquid properties, and application in chemical and bio analysis methods and devices

K Mawatari, Y Kazoe, H Shimizu, Y Pihosh, T Kitamori - 2014 - ACS Publications
Engineering using liquids confined in channels 10− 1000 nm in dimension, or “extended-
nanofluidics,” is the next target of microfluidic science. Liquid properties at this scale were …

[HTML][HTML] Optical tracking of nanoscale particles in microscale environments

PP Mathai, JA Liddle, SM Stavis - Applied physics reviews, 2016 - pubs.aip.org
The trajectories of nanoscale particles through microscale environments record useful
information about both the particles and the environments. Optical microscopes provide …

Electrokinetically-driven transport of DNA through focused ion beam milled nanofluidic channels

LD Menard, JM Ramsey - Analytical chemistry, 2013 - ACS Publications
The electrophoretically driven transport of double-stranded λ-phage DNA through focused
ion beam (FIB) milled nanochannels is described. Nanochannels were fabricated having …

Convex lens-induced nanoscale templating

DJ Berard, F Michaud, S Mahshid… - Proceedings of the …, 2014 - National Acad Sciences
We demonstrate a new platform, convex lens-induced nanoscale templating (CLINT), for
dynamic manipulation and trapping of single DNA molecules. In the CLINT technique, the …

Statistical properties of a slit-confined wormlike chain of finite length

Y Teng, NT Andersen, JZY Chen - Macromolecules, 2021 - ACS Publications
The wormlike-chain model is commonly used to describe the statistical properties of DNA
and liquid-crystal polymers. Following the Green's function approach, here we present the …

Transverse dielectrophoretic-based DNA nanoscale confinement

S Mahshid, J Lu, AA Abidi, R Sladek, WW Reisner… - Scientific reports, 2018 - nature.com
Confinement of single molecules within nanoscale environments is crucial in a range of
fields, including biomedicine, genomics, and biophysics. Here, we present a method that …

Free Energy of a Polymer in Slit-like Confinement from the Odijk Regime to the Bulk

JS Leith, A Kamanzi, D Sean, D Berard… - …, 2016 - ACS Publications
We directly measure the free energy of confinement for semiflexible polymers from the
nanoscale to bulk regimes in slit-like confinement. We use convex lens-induced confinement …

Self-avoiding wormlike chain confined in a cylindrical tube: scaling behavior

JZY Chen - Physical Review Letters, 2018 - APS
Within a confining tube section, the multithreads of a strongly confined, backfolding polymer
exert the excluded-volume repulsions on each other and produce physical properties that …

Dynamics and conformation of semiflexible polymers in strong quasi-1D and-2D confinement

YL Chen, YH Lin, JF Chang, P Lin - Macromolecules, 2014 - ACS Publications
We investigate the conformation and relaxation dynamics of single DNA molecules in strong
confinement (smaller than persistence length) with coarse-grained semiflexible chain (SFC) …