[HTML][HTML] Facing climate change: biotechnology of iconic Mediterranean woody crops
C De Ollas, R Morillón, V Fotopoulos… - Frontiers in Plant …, 2019 - frontiersin.org
The Mediterranean basin is especially sensitive to the adverse outcomes of climate change
and especially to variations in rainfall patterns and the incidence of extremely high …
and especially to variations in rainfall patterns and the incidence of extremely high …
(Differential) co-expression analysis of gene expression: a survey of best practices
HA Chowdhury, DK Bhattacharyya… - IEEE/ACM transactions …, 2019 - ieeexplore.ieee.org
Analysis of gene expression data is widely used in transcriptomic studies to understand
functions of molecules inside a cell and interactions among molecules. Differential co …
functions of molecules inside a cell and interactions among molecules. Differential co …
Complex scaffold remodeling in plant triterpene biosynthesis
R De La Peña, H Hodgson, JCT Liu, MJ Stephenson… - Science, 2023 - science.org
Triterpenes with complex scaffold modifications are widespread in the plant kingdom.
Limonoids are an exemplary family that are responsible for the bitter taste in citrus (eg …
Limonoids are an exemplary family that are responsible for the bitter taste in citrus (eg …
Combinatorial Regulation of Stilbene Synthase Genes by WRKY and MYB Transcription Factors in Grapevine (Vitis vinifera L.)
Stilbene synthase (STS) is the key enzyme leading to the biosynthesis of resveratrol.
Recently we reported two R2R3-MYB transcription factor (TF) genes that regulate the …
Recently we reported two R2R3-MYB transcription factor (TF) genes that regulate the …
A systems-oriented analysis of the grapevine R2R3-MYB transcription factor family uncovers new insights into the regulation of stilbene accumulation
DCJ Wong, R Schlechter, A Vannozzi, J Höll… - DNA …, 2016 - academic.oup.com
Abstract R2R3-MYB transcription factors (TFs) belong to a large and functionally diverse
protein superfamily in plants. In this study, we explore the evolution and function of this …
protein superfamily in plants. In this study, we explore the evolution and function of this …
Identification of key enzymes responsible for protolimonoid biosynthesis in plants: Opening the door to azadirachtin production
H Hodgson, R De La Peña… - Proceedings of the …, 2019 - National Acad Sciences
Limonoids are natural products made by plants belonging to the Meliaceae (Mahogany) and
Rutaceae (Citrus) families. They are well known for their insecticidal activity, contribution to …
Rutaceae (Citrus) families. They are well known for their insecticidal activity, contribution to …
The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and …
R Loyola, D Herrera, A Mas, DCJ Wong… - Journal of …, 2016 - academic.oup.com
Grapevine (Vitis vinifera L.) is a species well known for its adaptation to radiation. However,
photomorphogenic factors related to UV-B responses have not been molecularly …
photomorphogenic factors related to UV-B responses have not been molecularly …
[HTML][HTML] Transcriptional regulatory network analysis of MYB transcription factor family genes in rice
MYB transcription factor (TF) is one of the largest TF families and regulates defense
responses to various stresses, hormone signaling as well as many metabolic and …
responses to various stresses, hormone signaling as well as many metabolic and …
[HTML][HTML] Distinct tissue-specific transcriptional regulation revealed by gene regulatory networks in maize
J Huang, J Zheng, H Yuan, K McGinnis - BMC plant biology, 2018 - Springer
Abstract Background Transcription factors (TFs) are proteins that can bind to DNA
sequences and regulate gene expression. Many TFs are master regulators in cells that …
sequences and regulate gene expression. Many TFs are master regulators in cells that …
[HTML][HTML] Utility and limitations of using gene expression data to identify functional associations
S Uygun, C Peng, MD Lehti-Shiu… - PLoS computational …, 2016 - journals.plos.org
Gene co-expression has been widely used to hypothesize gene function through guilt-by
association. However, it is not clear to what degree co-expression is informative, whether it …
association. However, it is not clear to what degree co-expression is informative, whether it …