The arms race between bacteria and their phage foes

HG Hampton, BNJ Watson, PC Fineran - Nature, 2020 - nature.com
Bacteria are under immense evolutionary pressure from their viral invaders—
bacteriophages. Bacteria have evolved numerous immune mechanisms, both innate and …

[HTML][HTML] The biology of CRISPR-Cas: backward and forward

F Hille, H Richter, SP Wong, M Bratovič, S Ressel… - Cell, 2018 - cell.com
In bacteria and archaea, clustered regularly interspaced short palindromic repeats
(CRISPR) and CRISPR-associated (Cas) proteins constitute an adaptive immune system …

Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6

JS Gootenberg, OO Abudayyeh, MJ Kellner, J Joung… - Science, 2018 - science.org
Rapid detection of nucleic acids is integral for clinical diagnostics and biotechnological
applications. We recently developed a platform termed SHERLOCK (specific high-sensitivity …

C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector

OO Abudayyeh, JS Gootenberg, S Konermann… - Science, 2016 - science.org
INTRODUCTION Almost all archaea and about half of bacteria possess clustered regularly
interspaced short palindromic repeat (CRISPR)–CRISPR-associated genes (Cas) adaptive …

An updated evolutionary classification of CRISPR–Cas systems

KS Makarova, YI Wolf, OS Alkhnbashi… - Nature reviews …, 2015 - nature.com
The evolution of CRISPR–cas loci, which encode adaptive immune systems in archaea and
bacteria, involves rapid changes, in particular numerous rearrangements of the locus …

RNA-targeting CRISPR–Cas systems

SPB van Beljouw, J Sanders… - Nature Reviews …, 2023 - nature.com
CRISPR–Cas is a widespread adaptive immune system in bacteria and archaea that
protects against viral infection by targeting specific invading nucleic acid sequences …

[HTML][HTML] The ecology and evolution of pangenomes

MA Brockhurst, E Harrison, JPJ Hall, T Richards… - Current Biology, 2019 - cell.com
Since the first genome-scale comparisons, it has been evident that the genomes of many
species are unbound by strict vertical descent: Large differences in gene content can occur …

[HTML][HTML] Biology and applications of CRISPR systems: harnessing nature's toolbox for genome engineering

AV Wright, JK Nuñez, JA Doudna - Cell, 2016 - cell.com
Bacteria and archaea possess a range of defense mechanisms to combat plasmids and viral
infections. Unique among these are the CRISPR-Cas (clustered regularly interspaced short …

Diverse evolutionary roots and mechanistic variations of the CRISPR-Cas systems

P Mohanraju, KS Makarova, B Zetsche, F Zhang… - Science, 2016 - science.org
BACKGROUND Prokaryotes have evolved multiple systems to combat invaders such as
viruses and plasmids. Examples of such defense systems include receptor masking …

CRISPR-Cas immunity in prokaryotes

LA Marraffini - Nature, 2015 - nature.com
Prokaryotic organisms are threatened by a large array of viruses and have developed
numerous defence strategies. Among these, only clustered, regularly interspaced short …