Implications of streamlining theory for microbial ecology

SJ Giovannoni, J Cameron Thrash… - The ISME …, 2014 - academic.oup.com
Whether a small cell, a small genome or a minimal set of chemical reactions with self-
replicating properties, simplicity is beguiling. As Leonardo da Vinci reportedly said,'simplicity …

SAR11 bacteria: the most abundant plankton in the oceans

SJ Giovannoni - Annual review of marine science, 2017 - annualreviews.org
SAR11 is a group of small, carbon-oxidizing bacteria that reach a global estimated
population size of 2.4× 1028 cells—approximately 25% of all plankton. They are found …

The Black Queen Hypothesis: evolution of dependencies through adaptive gene loss

JJ Morris, RE Lenski, ER Zinser - MBio, 2012 - Am Soc Microbiol
Reductive genomic evolution, driven by genetic drift, is common in endosymbiotic bacteria.
Genome reduction is less common in free-living organisms, but it has occurred in the …

Sulfonate-based networks between eukaryotic phytoplankton and heterotrophic bacteria in the surface ocean

BP Durham, AK Boysen, LT Carlson… - Nature …, 2019 - nature.com
In the surface ocean, phytoplankton transform inorganic substrates into organic matter that
fuels the activity of heterotrophic microorganisms, creating intricate metabolic networks that …

Seasonality in ocean microbial communities

SJ Giovannoni, KL Vergin - Science, 2012 - science.org
Ocean warming occurs every year in seasonal cycles that can help us to understand long-
term responses of plankton to climate change. Rhythmic seasonal patterns of microbial …

Microbial assembly, interaction, functioning, activity and diversification: a review derived from community compositional data

J Liu, Z Meng, X Liu, XH Zhang - Marine Life Science & Technology, 2019 - Springer
Microorganisms play crucial roles in maintaining ecosystem stability. The last two decades
have witnessed an upsurge in studies on marine microbial community composition using …

Black Queen evolution: the role of leakiness in structuring microbial communities

JJ Morris - Trends in Genetics, 2015 - cell.com
Black Queen (BQ) functions are biological processes that yield neither purely private nor
purely public products. This partitioning of benefits, also called 'leakiness', can produce …

Microbial oceanography and the Hawaii Ocean Time-series programme

DM Karl, MJ Church - Nature Reviews Microbiology, 2014 - nature.com
Abstract The Hawaii Ocean Time-series (HOT) programme has been tracking microbial and
biogeochemical processes in the North Pacific Subtropical Gyre since October 1988. The …

Streamlining and core genome conservation among highly divergent members of the SAR11 clade

J Grote, JC Thrash, MJ Huggett, ZC Landry, P Carini… - MBio, 2012 - Am Soc Microbiol
ABSTRACT SAR11 is an ancient and diverse clade of heterotrophic bacteria that are
abundant throughout the world's oceans, where they play a major role in the ocean carbon …

Nutrient requirements for growth of the extreme oligotroph 'Candidatus Pelagibacter ubique' HTCC1062 on a defined medium

P Carini, L Steindler, S Beszteri… - The ISME journal, 2013 - academic.oup.com
Chemoheterotrophic marine bacteria of the SAR11 clade are Earth's most abundant
organisms. Following the first cultivation of a SAR11 bacterium,'Candidatus Pelagibacter …