Biology of mammalian L1 retrotransposons

EM Ostertag, HH Kazazian Jr - Annual review of genetics, 2001 - annualreviews.org
▪ Abstract L1 retrotransposons comprise 17% of the human genome. Although most L1s are
inactive, some elements remain capable of retrotransposition. L1 elements have a long …

Structural determinants and mechanism of HIV-1 genome packaging

K Lu, X Heng, MF Summers - Journal of molecular biology, 2011 - Elsevier
Like all retroviruses, the human immunodeficiency virus selectively packages two copies of
its unspliced RNA genome, both of which are utilized for strand-transfer-mediated …

Structural classification of zinc fingers: survey and summary

SS Krishna, I Majumdar, NV Grishin - Nucleic acids research, 2003 - academic.oup.com
Zinc fingers are small protein domains in which zinc plays a structural role contributing to the
stability of the domain. Zinc fingers are structurally diverse and are present among proteins …

NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the Ψ-RNA packaging signal. Implications for genome recognition

GK Amarasinghe, RN De Guzman, RB Turner… - Journal of molecular …, 2000 - Elsevier
The RNA genome of the human immunodeficiency virus type-1 (HIV-1) contains a∼ 120
nucleotide Ψ-packaging signal that is recognized by the nucleocapsid (NC) domain of the …

The ubiquitous nature of RNA chaperone proteins

G Cristofari, JL Darlix - 2002 - Elsevier
RNA chaperones are ubiquitous and abundant proteins found in all living organisms and
viruses, where they interact with various classes of RNA. These highly diverse families of …

Retroviral Gag protein–RNA interactions: Implications for specific genomic RNA packaging and virion assembly

ED Olson, K Musier-Forsyth - Seminars in cell & developmental biology, 2019 - Elsevier
Retroviral Gag proteins are responsible for coordinating many aspects of virion assembly.
Gag possesses two distinct nucleic acid binding domains, matrix (MA) and nucleocapsid …

The retroviral capsid domain dictates virion size, morphology, and coassembly of gag into virus-like particles

D Ako-Adjei, MC Johnson, VM Vogt - Journal of virology, 2005 - Am Soc Microbiol
The retroviral structural protein, Gag, is capable of independently assembling into virus-like
particles (VLPs) in living cells and in vitro. Immature VLPs of human immunodeficiency virus …

Genome-wide analysis of CCHC-type zinc finger (ZCCHC) proteins in yeast, Arabidopsis, and humans

U Aceituno-Valenzuela, R Micol-Ponce… - Cellular and Molecular …, 2020 - Springer
The diverse eukaryotic proteins that contain zinc fingers participate in many aspects of
nucleic acid metabolism, from DNA transcription to RNA degradation, post-transcriptional …

The βE-domain of wheat Ec-1 metallothionein: a metal-binding domain with a distinctive structure

EA Peroza, R Schmucki, P Güntert, E Freisinger… - Journal of molecular …, 2009 - Elsevier
Metallothioneins (MTs) are ubiquitous cysteine-rich proteins with a high affinity for divalent
metal ions such as ZnII, CuI, and CdII that are involved in metal ion homeostasis and …

Insights into RAG Evolution from the Identification of “Missing Link” Family A RAGL Transposons

EC Martin, L Le Targa… - Molecular Biology …, 2023 - academic.oup.com
A series of “molecular domestication” events are thought to have converted an invertebrate
RAG-like (RAGL) transposase into the RAG1–RAG2 (RAG) recombinase, a critical enzyme …