[HTML][HTML] Inflammation and nutritional science for programs/policies and interpretation of research evidence (INSPIRE)

DJ Raiten, FAS Ashour, AC Ross, SN Meydani… - The Journal of …, 2015 - Elsevier
An increasing recognition has emerged of the complexities of the global health agenda—
specifically, the collision of infections and noncommunicable diseases and the dual burden …

Vitamin A and the epigenome

S Bar-El Dadon, R Reifen - Critical reviews in food science and …, 2017 - Taylor & Francis
The epigenetic phenomena refer to heritable changes in gene expression other than those
in the DNA sequence, such as DNA methylation and histone modifications. Major research …

DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes

D Aran, S Sabato, A Hellman - Genome biology, 2013 - Springer
Background Abnormal epigenetic marking is well documented in gene promoters of cancer
cells, but the study of distal regulatory siteshas lagged behind. We performed a systematic …

DNA methylation status predicts cell type‐specific enhancer activity

M Wiench, S John, S Baek, TA Johnson… - The EMBO …, 2011 - embopress.org
Cell‐selective glucocorticoid receptor (GR) binding to distal regulatory elements is
associated with cell type‐specific regions of locally accessible chromatin. These regions can …

Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA

AL Statham, MD Robinson, JZ Song… - Genome …, 2012 - genome.cshlp.org
The complex relationship between DNA methylation, chromatin modification, and underlying
DNA sequence is often difficult to unravel with existing technologies. Here, we describe a …

Epigenetic changes in pediatric solid tumors: promising new targets

ER Lawlor, CJ Thiele - Clinical cancer research, 2012 - AACR
Cancer is being reinterpreted in the light of recent discoveries related to the histone code
and the dynamic nature of epigenetic regulation and control of gene programs during …

Nutriepigenomics in environmental-associated oxidative stress

K Rubio, EY Hernández-Cruz, DG Rogel-Ayala… - Antioxidants, 2023 - mdpi.com
Complex molecular mechanisms define our responses to environmental stimuli. Beyond the
DNA sequence itself, epigenetic machinery orchestrates changes in gene expression …

ENdb: a manually curated database of experimentally supported enhancers for human and mouse

X Bai, S Shi, B Ai, Y Jiang, Y Liu, X Han… - Nucleic acids …, 2020 - academic.oup.com
Enhancers are a class of cis-regulatory elements that can increase gene transcription by
forming loops in intergenic regions, introns and exons. Enhancers, as well as their …

Phosphorylation of distinct sites in MeCP2 modifies cofactor associations and the dynamics of transcriptional regulation

ML Gonzales, S Adams, KW Dunaway… - Molecular and cellular …, 2012 - Taylor & Francis
Mutations in the gene encoding methyl-CpG-binding protein 2 (MeCP2) lead to disrupted
neuronal function and can cause the neurodevelopmental disorder Rett syndrome. MeCP2 …

Targeted DNA methylation by homology-directed repair in mammalian cells. Transcription reshapes methylation on the repaired gene

A Morano, T Angrisano, G Russo, R Landi… - Nucleic acids …, 2013 - academic.oup.com
We report that homology-directed repair of a DNA double-strand break within a single copy
Green Fluorescent Protein (GFP) gene in HeLa cells alters the methylation pattern at the site …