Distinct motifs in the E protein are required for SARS-CoV-2 virus particle formation and lysosomal deacidification in host cells

K Miura, Y Suzuki, K Ishida, M Arakawa, H Wu… - Journal of …, 2023 - Am Soc Microbiol
Severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) is a major public health
concern, but the mechanisms underlying its viral particle formation are not well understood …

Overcoming antibody-resistant SARS-CoV-2 variants with bispecific antibodies constructed using non-neutralizing antibodies

T Inoue, Y Yamamoto, K Sato, Y Okemoto-Nakamura… - Iscience, 2024 - cell.com
A current challenge is the emergence of SARS-CoV-2 variants, such as BQ. 1.1 and XBB.
1.5, that can evade immune defenses, thereby limiting antibody drug effectiveness …

Adaptive variations in SARS-CoV-2 spike proteins: effects on distinct virus-cell entry stages

E Qing, T Gallagher - Mbio, 2023 - Am Soc Microbiol
Evolved SARS-CoV-2 variants of concern (VOCs) spread through human populations in
succession. Major virus variations are in the entry-facilitating viral spike (S) proteins; …

Biochemical analysis of packing and assembling heptad repeat motifs in the coronavirus spike protein trimer

J Kobayashi, K Kanou, H Okura, TMST Akter, S Fukushi… - mBio, 2024 - journals.asm.org
During a coronavirus infection, the spike protein undergoes sequential structural transitions
triggered by its receptor and the host protease at the interface between the virus and cell …

[HTML][HTML] A cell-free platform to measure coronavirus membrane fusion

T Kicmal, E Qing, GM Hawkins, A Wilcox, T Gallagher - STAR protocols, 2023 - Elsevier
Here we present a protocol to measure coronavirus-mediated membrane fusion, an
essential event in coronavirus cell entry. The approach uses nanoluciferase (Nluc)“HiBiT” …

SARS-CoV-2 fusion peptide sculpting of a membrane with insertion of charged and polar groups

SR Van Doren, BS Scott, RK Koppisetti - Structure, 2023 - cell.com
The fusion peptide of SARS-CoV-2 spike is essential for infection. How this charged and
hydrophobic domain occupies and affects membranes needs clarification. Its depth in …

Ultrapotent SARS coronavirus-neutralizing single-domain antibodies that bind a conserved membrane proximal epitope of the spike

S De Cae, I Van Molle, L van Schie, SR Shoemaker… - bioRxiv, 2023 - biorxiv.org
Currently circulating SARS-CoV-2 variants have gained complete or significant resistance to
all SARS-CoV-2-neutralizing antibodies that have been used in the clinic. Such antibodies …

Markerauto2: A fast and robust fully automatic fiducial marker-based tilt series alignment software for electron tomography

Z Xu, H Li, X Wan, JJ Fernández, F Sun, F Zhang… - Structure, 2024 - cell.com
Cryoelectron tomography (cryo-ET) has become an indispensable technology for visualizing
in situ biological ultrastructures, where the tilt series alignment is the key step to obtain a …

The Art of Viral Membrane Fusion and Penetration

SL Winter, P Chlanda - Virus Infected Cells, 2023 - Springer
As obligate pathogens, viruses have developed diverse mechanisms to deliver their
genome across host cell membranes to sites of virus replication. While enveloped viruses …

A Framework for the Design, Production, and Evaluation of Scientific Visualizations

KE Zhang, S Saharan, G McGill, J Jenkinson - … Humanizing Healthcare and …, 2023 - Springer
Visualizations play a critical role in discovering, understanding, interpreting, synthesizing,
and communicating scientific knowledge. Effective scientific visualization requires careful …