Transfer learning enables predictions in network biology

CV Theodoris, L Xiao, A Chopra, MD Chaffin… - Nature, 2023 - nature.com
Mapping gene networks requires large amounts of transcriptomic data to learn the
connections between genes, which impedes discoveries in settings with limited data …

NLRP12-PANoptosome activates PANoptosis and pathology in response to heme and PAMPs

B Sundaram, N Pandian, R Mall, Y Wang, R Sarkar… - Cell, 2023 - cell.com
Cytosolic innate immune sensors are critical for host defense and form complexes, such as
inflammasomes and PANoptosomes, that induce inflammatory cell death. The sensor …

[HTML][HTML] Single-cell proteo-genomic reference maps of the hematopoietic system enable the purification and massive profiling of precisely defined cell states

S Triana, D Vonficht, L Jopp-Saile, S Raffel, R Lutz… - Nature …, 2021 - nature.com
Single-cell genomics technology has transformed our understanding of complex cellular
systems. However, excessive cost and a lack of strategies for the purification of newly …

Exploiting single-cell tools in gene and cell therapy

D Bode, AH Cull, JA Rubio-Lara, DG Kent - Frontiers in immunology, 2021 - frontiersin.org
Single-cell molecular tools have been developed at an incredible pace over the last five
years as sequencing costs continue to drop and numerous molecular assays have been …

Single-cell analyses reveal megakaryocyte-biased hematopoiesis in myelofibrosis and identify mutant clone-specific targets

B Psaila, G Wang, A Rodriguez-Meira, R Li… - Molecular cell, 2020 - cell.com
Myelofibrosis is a severe myeloproliferative neoplasm characterized by increased numbers
of abnormal bone marrow megakaryocytes that induce fibrosis, destroying the hematopoietic …

Transitions in lineage specification and gene regulatory networks in hematopoietic stem/progenitor cells over human development

A Roy, G Wang, D Iskander, S O'Byrne, N Elliott… - Cell Reports, 2021 - cell.com
Human hematopoiesis is a dynamic process that starts in utero 18–21 days post-conception.
Understanding the site-and stage-specific variation in hematopoiesis is important if we are to …

Increasing complexity of molecular landscapes in human hematopoietic stem and progenitor cells during development and aging

SM Watt, P Hua, I Roberts - International Journal of Molecular Sciences, 2022 - mdpi.com
The past five decades have seen significant progress in our understanding of human
hematopoiesis. This has in part been due to the unprecedented development of advanced …

The BET inhibitor CPI203 promotes ex vivo expansion of cord blood long-term repopulating HSCs and megakaryocytes

P Hua, J Hester, G Adigbli, R Li, B Psaila… - Blood, The Journal …, 2020 - ashpublications.org
Although cytokine-mediated expansion of human hematopoietic stem cells (HSCs) can
result in high yields of hematopoietic progenitor cells, this generally occurs at the expense of …

Morphological and histochemical identification of telocytes in adult yak epididymis

D Yang, L Yuan, S Chen, Y Zhang, X Ma, Y Xing… - Scientific Reports, 2023 - nature.com
Telocytes (TCs) are a newly discovered type of mesenchymal cell that are closely related to
the tissue's internal environment. The study aimed to investigate the morphological …

Characterization of hematopoiesis in sickle cell disease by prospective isolation of stem and progenitor cells

SS Tolu, K Wang, Z Yan, S Zhang, K Roberts… - Cells, 2020 - mdpi.com
The consequences of sickle cell disease (SCD) include ongoing hematopoietic stress,
hemolysis, vascular damage, and effect of chronic therapies, such as blood transfusions and …