Trithorax group proteins: switching genes on and keeping them active
B Schuettengruber, AM Martinez, N Iovino… - … reviews Molecular cell …, 2011 - nature.com
Cellular memory is provided by two counteracting groups of chromatin proteins termed
Trithorax group (TrxG) and Polycomb group (PcG) proteins. TrxG proteins activate …
Trithorax group (TrxG) and Polycomb group (PcG) proteins. TrxG proteins activate …
[HTML][HTML] Mammalian NET-seq reveals genome-wide nascent transcription coupled to RNA processing
Transcription is a highly dynamic process. Consequently, we have developed native
elongating transcript sequencing technology for mammalian chromatin (mNET-seq), which …
elongating transcript sequencing technology for mammalian chromatin (mNET-seq), which …
[HTML][HTML] H3K4me3 breadth is linked to cell identity and transcriptional consistency
Trimethylation of histone H3 at lysine 4 (H3K4me3) is a chromatin modification known to
mark the transcription start sites of active genes. Here, we show that H3K4me3 domains that …
mark the transcription start sites of active genes. Here, we show that H3K4me3 domains that …
[HTML][HTML] On the way of revealing coactivator complexes cross-talk during transcriptional activation
AN Krasnov, MY Mazina, JV Nikolenko, NE Vorobyeva - Cell & Bioscience, 2016 - Springer
Transcriptional activation is a complex, multistage process implemented by hundreds of
proteins. Many transcriptional proteins are organized into coactivator complexes, which …
proteins. Many transcriptional proteins are organized into coactivator complexes, which …
[HTML][HTML] Genome-wide association of Yorkie with chromatin and chromatin-remodeling complexes
The Hippo pathway regulates growth through the transcriptional coactivator Yorkie, but how
Yorkie promotes transcription remains poorly understood. We address this by characterizing …
Yorkie promotes transcription remains poorly understood. We address this by characterizing …
Drosophila Set1 is the major histone H3 lysine 4 trimethyltransferase with role in transcription
Histone H3 lysine 4 trimethylation (H3K4me3) is a major hallmark of promoter‐proximal
histones at transcribed genes. Here, we report that a previously uncharacterized Drosophila …
histones at transcribed genes. Here, we report that a previously uncharacterized Drosophila …
Damage-responsive elements in Drosophila regeneration
E Vizcaya-Molina, CC Klein, F Serras… - Genome …, 2018 - genome.cshlp.org
One of the most important questions in regenerative biology is to unveil how and when
genes change expression and trigger regeneration programs. The resetting of gene …
genes change expression and trigger regeneration programs. The resetting of gene …
Absence of canonical marks of active chromatin in developmentally regulated genes
The interplay of active and repressive histone modifications is assumed to have a key role in
the regulation of gene expression. In contrast to this generally accepted view, we show that …
the regulation of gene expression. In contrast to this generally accepted view, we show that …
[HTML][HTML] Productive visualization of high-throughput sequencing data using the SeqCode open portable platform
E Blanco, M González-Ramírez, L Di Croce - Scientific Reports, 2021 - nature.com
Large-scale sequencing techniques to chart genomes are entirely consolidated. Stable
computational methods to perform primary tasks such as quality control, read mapping, peak …
computational methods to perform primary tasks such as quality control, read mapping, peak …
[HTML][HTML] A temporal transcriptional switch governs stem cell division, neuronal numbers, and maintenance of differentiation
The importance of producing the correct numbers of neurons during development is
illustrated by both evolutionary enhancement of cognitive capacities in larger brains, and …
illustrated by both evolutionary enhancement of cognitive capacities in larger brains, and …