Single-cell proteomics enabled by next-generation sequencing or mass spectrometry
In the last decade, single-cell RNA sequencing routinely performed on large numbers of
single cells has greatly advanced our understanding of the underlying heterogeneity of …
single cells has greatly advanced our understanding of the underlying heterogeneity of …
Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments
Analyzing proteins from single cells by tandem mass spectrometry (MS) has recently
become technically feasible. While such analysis has the potential to accurately quantify …
become technically feasible. While such analysis has the potential to accurately quantify …
Exploration of cell state heterogeneity using single-cell proteomics through sensitivity-tailored data-independent acquisition
V Petrosius, P Aragon-Fernandez, N Üresin… - Nature …, 2023 - nature.com
Single-cell resolution analysis of complex biological tissues is fundamental to capture cell-
state heterogeneity and distinct cellular signaling patterns that remain obscured with …
state heterogeneity and distinct cellular signaling patterns that remain obscured with …
Exploring functional protein covariation across single cells using nPOP
Background Many biological processes, such as cell division cycle and drug resistance, are
reflected in protein covariation across single cells. This covariation can be quantified and …
reflected in protein covariation across single cells. This covariation can be quantified and …
An automated nanowell-array workflow for quantitative multiplexed single-cell proteomics sample preparation at high sensitivity
C Ctortecka, D Hartlmayr, A Seth, S Mendjan… - Molecular & Cellular …, 2023 - ASBMB
Multiplexed and label-free mass spectrometry–based approaches with single-cell resolution
have attributed surprising heterogeneity to presumed homogenous cell populations. Even …
have attributed surprising heterogeneity to presumed homogenous cell populations. Even …
[HTML][HTML] Recent advances in the field of single-cell proteomics
V Petrosius, EM Schoof - Translational oncology, 2023 - Elsevier
The field of single-cell omics is rapidly progressing. Although DNA and RNA sequencing-
based methods have dominated the field to date, global proteome profiling has also entered …
based methods have dominated the field to date, global proteome profiling has also entered …
Rapid, one-step sample processing for label-free single-cell proteomics
Sample preparation for single-cell proteomics is generally performed in a one-pot workflow
with multiple dispensing and incubation steps. These hours-long processes can be labor …
with multiple dispensing and incubation steps. These hours-long processes can be labor …
[HTML][HTML] Three-dimensional feature matching improves coverage for single-cell proteomics based on ion mobility filtering
Single-cell proteomics (scProteomics) promises to advance our understanding of cell
functions within complex biological systems. However, a major challenge of current methods …
functions within complex biological systems. However, a major challenge of current methods …
A review of the current state of single-cell proteomics and future perspective
R Ahmad, B Budnik - Analytical and Bioanalytical Chemistry, 2023 - Springer
Single-cell methodologies and technologies have started a revolution in biology which until
recently has primarily been limited to deep sequencing and imaging modalities. With the …
recently has primarily been limited to deep sequencing and imaging modalities. With the …
SingPro: a knowledge base providing single-cell proteomic data
Single-cell proteomics (SCP) has emerged as a powerful tool for detecting cellular
heterogeneity, offering unprecedented insights into biological mechanisms that are masked …
heterogeneity, offering unprecedented insights into biological mechanisms that are masked …