Illuminating the dark phosphoproteome

EJ Needham, BL Parker, T Burykin, DE James… - Science …, 2019 - science.org
Protein phosphorylation is a major regulator of protein function and biological outcomes.
This was first recognized through functional biochemical experiments, and in the past …

[HTML][HTML] Network resilience

X Liu, D Li, M Ma, BK Szymanski, HE Stanley, J Gao - Physics Reports, 2022 - Elsevier
Many systems on our planet shift abruptly and irreversibly from the desired state to an
undesired state when forced across a “tipping point”. Some examples are mass extinctions …

Foundations of chemical reaction network theory

M Feinberg - 2019 - Springer
When I am called upon to teach fluid mechanics, I always show students a copy of Newton's
Principia. I do this for a number of reasons, not least of which is the connection I hope they …

Molecular biology of atherosclerosis

PN Hopkins - Physiological reviews, 2013 - journals.physiology.org
At least 468 individual genes have been manipulated by molecular methods to study their
effects on the initiation, promotion, and progression of atherosclerosis. Most clinicians and …

[图书][B] Stochastic processes in cell biology

PC Bressloff - 2014 - Springer
One of the major challenges in modern biology is to understand how the molecular
components of a living cell operate in a highly noisy environment. What are the specific …

Frequency-modulated pulses of ERK activity transmit quantitative proliferation signals

JG Albeck, GB Mills, JS Brugge - Molecular cell, 2013 - cell.com
Summary The EGF-stimulated ERK/MAPK pathway is a key conduit for cellular proliferation
signals and a therapeutic target in many cancers. Here, we characterize two central …

Regulation of liquid–liquid phase separation with focus on post-translational modifications

YY Luo, JJ Wu, YM Li - Chemical communications, 2021 - pubs.rsc.org
Liquid–liquid phase separation (LLPS), a type of phase transition that is important in
organisms, is a unique means of forming biomolecular condensates. LLPS plays a …

Cell-signalling dynamics in time and space

BN Kholodenko - Nature reviews Molecular cell biology, 2006 - nature.com
The specificity of cellular responses to receptor stimulation is encoded by the spatial and
temporal dynamics of downstream signalling networks. Temporal dynamics are coupled to …

Persistence of asthma requires multiple feedback circuits involving type 2 innate lymphoid cells and IL-33

CA Christianson, NP Goplen, I Zafar, C Irvin… - Journal of Allergy and …, 2015 - Elsevier
Background Asthma in a mouse model spontaneously resolves after cessation of allergen
exposure. We developed a mouse model in which asthma features persisted for 6 months …

Signalling ballet in space and time

BN Kholodenko, JF Hancock, W Kolch - Nature reviews Molecular cell …, 2010 - nature.com
Although we have amassed extensive catalogues of signalling network components, our
understanding of the spatiotemporal control of emergent network structures has lagged …