AI-powered therapeutic target discovery

FW Pun, IV Ozerov, A Zhavoronkov - Trends in pharmacological sciences, 2023 - cell.com
Disease modeling and target identification are the most crucial initial steps in drug
discovery, and influence the probability of success at every step of drug development …

Ensemble deep learning in bioinformatics

Y Cao, TA Geddes, JYH Yang, P Yang - Nature Machine Intelligence, 2020 - nature.com
The remarkable flexibility and adaptability of ensemble methods and deep learning models
have led to the proliferation of their application in bioinformatics research. Traditionally …

A small-molecule TNIK inhibitor targets fibrosis in preclinical and clinical models

F Ren, A Aliper, J Chen, H Zhao, S Rao, C Kuppe… - Nature …, 2024 - nature.com
Idiopathic pulmonary fibrosis (IPF) is an aggressive interstitial lung disease with a high
mortality rate. Putative drug targets in IPF have failed to translate into effective therapies at …

Molecular sets (MOSES): a benchmarking platform for molecular generation models

D Polykovskiy, A Zhebrak… - Frontiers in …, 2020 - frontiersin.org
Generative models are becoming a tool of choice for exploring the molecular space. These
models learn on a large training dataset and produce novel molecular structures with similar …

[HTML][HTML] Identification of therapeutic targets for amyotrophic lateral sclerosis using PandaOmics–an AI-enabled biological target discovery platform

FW Pun, BHM Liu, X Long, HW Leung… - Frontiers in aging …, 2022 - frontiersin.org
Amyotrophic lateral sclerosis (ALS) is a severe neurodegenerative disease with ill-defined
pathogenesis, calling for urgent developments of new therapeutic regimens. Herein, we …

[HTML][HTML] Artificial intelligence for aging and longevity research: Recent advances and perspectives

A Zhavoronkov, P Mamoshina, Q Vanhaelen… - Ageing research …, 2019 - Elsevier
The applications of modern artificial intelligence (AI) algorithms within the field of aging
research offer tremendous opportunities. Aging is an almost universal unifying feature …

[HTML][HTML] Hallmarks of aging-based dual-purpose disease and age-associated targets predicted using PandaOmics AI-powered discovery engine

FW Pun, GHD Leung, HW Leung, BHM Liu… - Aging (Albany …, 2022 - ncbi.nlm.nih.gov
Aging biology is a promising and burgeoning research area that can yield dual-purpose
pathways and protein targets that may impact multiple diseases, while retarding or possibly …

COX7A1 enhances the sensitivity of human NSCLC cells to cystine deprivation-induced ferroptosis via regulating mitochondrial metabolism

Y Feng, J Xu, M Shi, R Liu, L Zhao, X Chen, M Li… - Cell death & …, 2022 - nature.com
COX7A1, a subunit of cytochrome c oxidase, holds an important position in the super-
assembly which integrates into multi-unit heteromeric complexes peripherally in the …

PandaOmics: an AI-driven platform for therapeutic target and biomarker discovery

P Kamya, IV Ozerov, FW Pun, K Tretina… - Journal of Chemical …, 2024 - ACS Publications
PandaOmics is a cloud-based software platform that applies artificial intelligence and
bioinformatics techniques to multimodal omics and biomedical text data for therapeutic …

[HTML][HTML] Vive la radiorésistance!: converging research in radiobiology and biogerontology to enhance human radioresistance for deep space exploration and …

F Cortese, D Klokov, A Osipov, J Stefaniak… - Oncotarget, 2018 - ncbi.nlm.nih.gov
While many efforts have been made to pave the way toward human space colonization, little
consideration has been given to the methods of protecting spacefarers against harsh cosmic …