Ecology and evolution of metabolic cross-feeding interactions in bacteria

G D'Souza, S Shitut, D Preussger, G Yousif… - Natural product …, 2018 - pubs.rsc.org
Literature covered: early 2000s to late 2017 Bacteria frequently exchange metabolites with
other micro-and macro-organisms. In these often obligate cross-feeding interactions, primary …

An evolutionary perspective on the Crabtree effect

T Pfeiffer, A Morley - Frontiers in molecular biosciences, 2014 - frontiersin.org
The capability to ferment sugars into ethanol is a key metabolic trait of yeasts. Crabtree-
positive yeasts use fermentation even in the presence of oxygen, where they could, in …

Complete nitrification by Nitrospira bacteria

H Daims, EV Lebedeva, P Pjevac, P Han, C Herbold… - Nature, 2015 - nature.com
Nitrification, the oxidation of ammonia via nitrite to nitrate, has always been considered to be
a two-step process catalysed by chemolithoautotrophic microorganisms oxidizing either …

Microbiota and reproducibility of rodent models

CL Franklin, AC Ericsson - Lab animal, 2017 - nature.com
The gut microbiota (GM) plays a critical role in human health and disease. Likewise, it is
becoming increasingly evident that changes or disruptions to the GM can have significant …

Shifts in growth strategies reflect tradeoffs in cellular economics

D Molenaar, R Van Berlo, D De Ridder… - Molecular systems …, 2009 - embopress.org
The growth rate‐dependent regulation of cell size, ribosomal content, and metabolic
efficiency follows a common pattern in unicellular organisms: with increasing growth rates …

Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts

L Fan, D Reynolds, M Liu, M Stark… - Proceedings of the …, 2012 - National Acad Sciences
Microorganisms often form symbiotic relationships with eukaryotes, and the complexity of
these relationships can range from those with one single dominant symbiont to associations …

Engineering microbial consortia for controllable outputs

SR Lindemann, HC Bernstein, HS Song… - The ISME …, 2016 - academic.oup.com
Much research has been invested into engineering microorganisms to perform desired
biotransformations; nonetheless, these efforts frequently fall short of expected results due to …

Why is metabolic labour divided in nitrification?

E Costa, J Pérez, JU Kreft - Trends in microbiology, 2006 - cell.com
Winogradsky discovered in 1890 that nitrification is carried out in two consecutive steps by
two distinct groups of bacteria: ammonia-oxidizing bacteria and nitrite-oxidizing bacteria. An …

The classification and evolution of bacterial cross-feeding

NW Smith, PR Shorten, E Altermann… - Frontiers in Ecology …, 2019 - frontiersin.org
Bacterial feeding has evolved toward specific evolutionary niches and the sources of energy
differ between species and strains. Although bacteria fundamentally compete for nutrients …

Cooperation in microbial communities and their biotechnological applications

M Cavaliere, S Feng, OS Soyer… - Environmental …, 2017 - Wiley Online Library
Microbial communities are increasingly utilized in biotechnology. Efficiency and productivity
in many of these applications depends on the presence of cooperative interactions between …