Environmental DNA/RNA for pathogen and parasite detection, surveillance, and ecology
Detection of pathogens, parasites, and other symbionts in environmental samples via
eDNA/eRNA (collectively eNA) is an increasingly important source of information about their …
eDNA/eRNA (collectively eNA) is an increasingly important source of information about their …
Real‐time genomics for One Health
The ongoing degradation of natural systems and other environmental changes has put our
society at a crossroad with respect to our future relationship with our planet. While the …
society at a crossroad with respect to our future relationship with our planet. While the …
Achieving zero extinction for land plants
RT Corlett - Trends in Plant Science, 2023 - cell.com
Despite the importance of plants for humans and the threats to their future, plant
conservation receives far less support compared with vertebrate conservation. Plants are …
conservation receives far less support compared with vertebrate conservation. Plants are …
Harnessing the omics revolution to address the global biodiversity crisis
LF De León, B Silva, KJ Avilés-Rodríguez… - Current Opinion in …, 2023 - Elsevier
Highlights•Human disturbances are driving the current biodiversity crisis.•Fundamental
biodiversity challenges include biodiversity discovery, loss, and preservation.•The omics …
biodiversity challenges include biodiversity discovery, loss, and preservation.•The omics …
ONTbarcoder 2.0: rapid species discovery and identification with real‐time barcoding facilitated by Oxford Nanopore R10. 4
Most arthropod species are undescribed and hidden in specimen‐rich samples that are
difficult to sort to species using morphological characters. For such samples, sorting to …
difficult to sort to species using morphological characters. For such samples, sorting to …
Network analysis with either Illumina or MinION reveals that detecting vertebrate species requires metabarcoding of iDNA from a diverse fly community
DNA obtained from invertebrates (iDNA) can be metabarcoded in order to survey vertebrate
communities. However, little attention has been paid to the interaction between the …
communities. However, little attention has been paid to the interaction between the …
Express barcoding with NextGenPCR and MinION for species‐level sorting of ecological samples
The use of DNA barcoding is well established for specimen identification and large‐scale
biodiversity discovery, but remains underutilized for time‐sensitive applications such as …
biodiversity discovery, but remains underutilized for time‐sensitive applications such as …
Illuminating Entomological Dark Matter with DNA Barcodes in an Era of Insect Decline, Deep Learning, and Genomics
R Meier, MKN Lawniczak… - Annual Review of …, 2024 - annualreviews.org
Most insects encountered in the field are initially entomological dark matter in that they
cannot be identified to species while alive. This explains the enduring quest for efficient …
cannot be identified to species while alive. This explains the enduring quest for efficient …
Highly Multiplexed Reverse-Transcription Loop-Mediated Isothermal Amplification and Nanopore Sequencing (LAMPore) for Wastewater-Based Surveillance
Wastewater-based surveillance (WBS) has gained attention as a strategy to monitor and
provide an early warning for disease outbreaks. Here, we applied an isothermal gene …
provide an early warning for disease outbreaks. Here, we applied an isothermal gene …
Microbial biomarkers of tree water status for next‐generation biomonitoring of forest ecosystems
Next‐generation biomonitoring proposes to combine machine‐learning algorithms with
environmental DNA data to automate the monitoring of the Earth's major ecosystems. In the …
environmental DNA data to automate the monitoring of the Earth's major ecosystems. In the …