[HTML][HTML] Big data for a small world: a review on databases and resources for studying microbiomes
P Sengupta, SKM Sivabalan, A Mahesh… - Journal of the Indian …, 2023 - Springer
Microorganisms are ubiquitous in nature and form complex community networks to survive
in various environments. This community structure depends on numerous factors like …
in various environments. This community structure depends on numerous factors like …
[HTML][HTML] High-efficiency plastome base editing in rice with TAL cytosine deaminase
Genome editing has been widely applied in nuclei but not so in organelles such as the
mitochondria and chloroplasts. The challenge for organelle genome editing is the limited …
mitochondria and chloroplasts. The challenge for organelle genome editing is the limited …
[PDF][PDF] Emergence of novel RNA-editing sites by changes in the binding affinity of a conserved PPR protein
FV Loiacono, D Walther, S Seeger… - Molecular Biology …, 2022 - academic.oup.com
RNA editing converts cytidines to uridines in plant organellar transcripts. Editing typically
restores codons for conserved amino acids. During evolution, specific C-to-U editing sites …
restores codons for conserved amino acids. During evolution, specific C-to-U editing sites …
[HTML][HTML] Chloroplast genome assemblies and comparative analyses of commercially important Vaccinium berry crops
AM Fahrenkrog, GO Matsumoto, K Toth… - Scientific Reports, 2022 - nature.com
Vaccinium is a large genus of shrubs that includes a handful of economically important berry
crops. Given the numerous hybridizations and polyploidization events, the taxonomy of this …
crops. Given the numerous hybridizations and polyploidization events, the taxonomy of this …
[HTML][HTML] Towards comprehensive integration and curation of chloroplast genomes
Z Hua, D Tian, C Jiang, S Song, Z Chen… - Plant biotechnology …, 2022 - ncbi.nlm.nih.gov
accepted 4 September 2022.* Correspondence (Tel+ 86 (10) 64087649; fax+ 86 (10)
64087649; email y_yuan0732@ 163. com; Tel+ 86 (10) 84097298; fax+ 86 (10) 84097720; …
64087649; email y_yuan0732@ 163. com; Tel+ 86 (10) 84097298; fax+ 86 (10) 84097720; …
[HTML][HTML] Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives
K Sielemann, B Pucker, N Schmidt, P Viehöver… - BMC genomics, 2022 - Springer
Background As the major source of sugar in moderate climates, sugar-producing beets
(Beta vulgaris subsp. vulgaris) have a high economic value. However, the low genetic …
(Beta vulgaris subsp. vulgaris) have a high economic value. However, the low genetic …
A Machine Learning Framework Identifies Plastid-Encoded Proteins Harboring C3 and C4 Distinguishing Sequence Information
N Yogadasan, AC Doxey… - Genome Biology and …, 2023 - academic.oup.com
C4 photosynthesis is known to have at least 61 independent origins across plant lineages
making it one of the most notable examples of convergent evolution. Of the> 60 independent …
making it one of the most notable examples of convergent evolution. Of the> 60 independent …
[HTML][HTML] Complete Chloroplast Genomes of 14 Subspecies of D. glomerata: Phylogenetic and Comparative Genomic Analyses
Y Jiao, G Feng, L Huang, G Nie, Z Li, Y Peng, D Li… - Genes, 2022 - mdpi.com
Orchardgrass (Dactylis glomerata L.) is a species in the Gramineae family that is highly
important economically and valued for its role in ecology. However, the phylogeny and …
important economically and valued for its role in ecology. However, the phylogeny and …
[HTML][HTML] Mangrove tree (Avicennia marina): insight into chloroplast genome evolutionary divergence and its comparison with related species from family Acanthaceae
Avicennia marina (family Acanthaceae) is a halotolerant woody shrub that grows wildly and
cultivated in the coastal regions. Despite its importance, the species suffers from lack of …
cultivated in the coastal regions. Despite its importance, the species suffers from lack of …
[HTML][HTML] Comparative genomics analysis of endangered wild Egyptian Moringa peregrina (Forssk.) Fiori plastome, with implications for the evolution of Brassicales …
HAM AbdAlla, VO Wanga, EM Mkala, SG Amenu… - Frontiers in …, 2023 - frontiersin.org
Moringa is a mono-genus belonging to the Moringaceae family, which includes 13 species.
Among them, Moringa peregrina is plant species native to the Arabian Peninsula, Southern …
Among them, Moringa peregrina is plant species native to the Arabian Peninsula, Southern …