Marine microbial community dynamics and their ecological interpretation

JA Fuhrman, JA Cram, DM Needham - Nature Reviews Microbiology, 2015 - nature.com
Recent advances in studying the dynamics of marine microbial communities have shown
that the composition of these communities follows predictable patterns and involves complex …

Synechococcus plasticity under environmental changes

C Callieri - FEMS microbiology letters, 2017 - academic.oup.com
Cyanobacteria are among the oldest photoautotrophic organisms on Earth, and have
contributed to shaping the planet's biogeochemistry with their significant biomass and key …

[HTML][HTML] Microbiome dynamics in a shrimp grow-out pond with possible outbreak of acute hepatopancreatic necrosis disease

WY Chen, TH Ng, JH Wu, JW Chen, HC Wang - Scientific reports, 2017 - nature.com
Acute hepatopancreatic necrosis disease (AHPND)(formerly, early mortality syndrome) is a
high-mortality-rate shrimp disease prevalent in shrimp farming areas. Although AHPND is …

Co-occurring Synechococcus ecotypes occupy four major oceanic regimes defined by temperature, macronutrients and iron

JA Sohm, NA Ahlgren, ZJ Thomson… - The ISME …, 2016 - academic.oup.com
Marine picocyanobacteria, comprised of the genera Synechococcus and Prochlorococcus,
are the most abundant and widespread primary producers in the ocean. More than 20 …

Phylogeny and taxonomy of Synechococcus–like cyanobacteria

J Komarek, JR Johansen, J Smarda, O Strunecký - Fottea, 2020 - collected.jcu.edu
Unicellular cyanobacteria constitute a substantial, ecologically important part of freshwater
and marine microflora. Solitary, elongated cyanobacterial cells without apparent slime …

Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight

CET Chow, R Sachdeva, JA Cram, JA Steele… - The ISME …, 2013 - academic.oup.com
Time-series are critical to understanding long-term natural variability in the oceans. Bacterial
communities in the euphotic zone were investigated for over a decade at the San Pedro …

[HTML][HTML] Diversity and Distribution of Marine Synechococcus: Multiple Gene Phylogenies for Consensus Classification and Development of qPCR Assays for Sensitive …

NA Ahlgren, G Rocap - Frontiers in Microbiology, 2012 - frontiersin.org
Marine Synechococcus is a globally significant genus of cyanobacteria that is comprised of
multiple genetic lineages or clades. These clades are thought to represent ecologically …

Multi‐locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus

S Mazard, M Ostrowski, F Partensky… - Environmental …, 2012 - Wiley Online Library
Conserved markers such as the 16S rRNA gene do not provide sufficient molecular
resolution to identify spatially structured populations of marine Synechococcus, or 'ecotypes' …

Antibiotic resistomes and microbiomes in the surface water along the code river in Indonesia reflect drainage basin anthropogenic activities

J Muurinen, WI Muziasari, J Hultman… - … science & technology, 2022 - ACS Publications
Water and sanitation are important factors in the emergence of antimicrobial resistance in
low-and middle-income countries. Drug residues, metals, and various wastes foster the …

Global Phylogeography of Marine Synechococcus in Coastal Areas Reveals Strong Community Shifts

H Doré, J Leconte, U Guyet, S Breton, GK Farrant… - Msystems, 2022 - Am Soc Microbiol
Marine Synechococcus comprise a numerically and ecologically prominent phytoplankton
group, playing a major role in both carbon cycling and trophic networks in all oceanic …