A lasting symbiosis: how the Hawaiian bobtail squid finds and keeps its bioluminescent bacterial partner

SV Nyholm, MJ McFall-Ngai - Nature Reviews Microbiology, 2021 - nature.com
For more than 30 years, the association between the Hawaiian bobtail squid, Euprymna
scolopes, and the bioluminescent bacterium Vibrio fischeri has been studied as a model …

A symbiotic view of life: we have never been individuals

SF Gilbert, J Sapp, AI Tauber - The Quarterly review of …, 2012 - journals.uchicago.edu
The notion of the “biological individual” is crucial to studies of genetics, immunology,
evolution, development, anatomy, and physiology. Each of these biological subdisciplines …

Host biology in light of the microbiome: ten principles of holobionts and hologenomes

SR Bordenstein, KR Theis - PLoS biology, 2015 - journals.plos.org
Groundbreaking research on the universality and diversity of microorganisms is now
challenging the life sciences to upgrade fundamental theories that once seemed …

Microbes drive evolution of animals and plants: the hologenome concept

E Rosenberg, I Zilber-Rosenberg - MBio, 2016 - Am Soc Microbiol
The hologenome concept of evolution postulates that the holobiont (host plus symbionts)
with its hologenome (host genome plus microbiome) is a level of selection in evolution …

A lasting symbiosis: how Vibrio fischeri finds a squid partner and persists within its natural host

KL Visick, EV Stabb, EG Ruby - Nature Reviews Microbiology, 2021 - nature.com
As our understanding of the human microbiome progresses, so does the need for natural
experimental animal models that promote a mechanistic understanding of beneficial …

Innate immune recognition of the microbiota promotes host-microbial symbiosis

H Chu, SK Mazmanian - Nature immunology, 2013 - nature.com
Pattern-recognition receptors (PRRs) are traditionally known to sense microbial molecules
during infection to initiate inflammatory responses. However, ligands for PRRs are not …

Animals in a bacterial world, a new imperative for the life sciences

M McFall-Ngai, MG Hadfield… - Proceedings of the …, 2013 - National Acad Sciences
In the last two decades, the widespread application of genetic and genomic approaches has
revealed a bacterial world astonishing in its ubiquity and diversity. This review examines …

Drosophila Antimicrobial Peptides and Lysozymes Regulate Gut Microbiota Composition and Abundance

A Marra, MA Hanson, S Kondo, B Erkosar, B Lemaitre - MBio, 2021 - Am Soc Microbiol
The gut microbiota affects the physiology and metabolism of animals and its alteration can
lead to diseases such as gut dysplasia or metabolic disorders. Several reports have shown …

Computational meta'omics for microbial community studies

N Segata, D Boernigen, TL Tickle… - Molecular systems …, 2013 - embopress.org
Complex microbial communities are an integral part of the Earth's ecosystem and of our
bodies in health and disease. In the last two decades, culture‐independent approaches …

Coral-associated micro-organisms and their roles in promoting coral health and thwarting diseases

CJ Krediet, KB Ritchie, VJ Paul… - Proceedings of the …, 2013 - royalsocietypublishing.org
Over the last decade, significant advances have been made in characterization of the coral
microbiota. Shifts in its composition often correlate with the appearance of signs of diseases …