Recent advances in computational prediction of drug absorption and permeability in drug discovery
Approximately 40%-60% of developing drugs failed during the clinical trials because of
ADME/Tox deficiencies. Virtual screening should not be restricted to optimize binding affinity …
ADME/Tox deficiencies. Virtual screening should not be restricted to optimize binding affinity …
Estimation of ADME properties in drug discovery: predicting Caco-2 cell permeability using atom-based stochastic and non-stochastic linear indices
JA Castillo-Garit, Y Marrero-Ponce, F Torrens… - Journal of …, 2008 - Elsevier
The in vitro determination of the permeability through cultured Caco-2 cells is the most often-
used in vitro model for drug absorption. In this report, we use the largest data set of …
used in vitro model for drug absorption. In this report, we use the largest data set of …
Drug Discovery and Regulatory Considerations for Improving In Silico and In Vitro Predictions that Use Caco-2 as a Surrogate for Human Intestinal Permeability …
CA Larregieu, LZ Benet - The AAPS journal, 2013 - Springer
There is a growing need for highly accurate in silico and in vitro predictive models to
facilitate drug discovery and development. Results from in vitro permeation studies across …
facilitate drug discovery and development. Results from in vitro permeation studies across …
Fragment-based in silico modeling of multi-target inhibitors against breast cancer-related proteins
A Speck-Planche, MNDS Cordeiro - Molecular Diversity, 2017 - Springer
Breast cancer is the most frequent cancer reported in women, being responsible for
hundreds of thousands of deaths. Chemotherapy has proven to be effective against this …
hundreds of thousands of deaths. Chemotherapy has proven to be effective against this …
[HTML][HTML] QuBiLS-MAS, open source multi-platform software for atom- and bond-based topological (2D) and chiral (2.5D) algebraic molecular descriptors …
JR Valdés-Martiní, Y Marrero-Ponce… - Journal of …, 2017 - Springer
Abstract Background In previous reports, Marrero-Ponce et al. proposed algebraic
formalisms for characterizing topological (2D) and chiral (2.5 D) molecular features through …
formalisms for characterizing topological (2D) and chiral (2.5 D) molecular features through …
In silico assessment of ADME properties: advances in Caco-2 cell monolayer permeability modeling
MÁ Cabrera-Pérez, NH Nam… - Current Topics in …, 2018 - ingentaconnect.com
One of the main goals of in silico Caco-2 cell permeability models is to identify those drug
substances with high intestinal absorption in human (HIA). For more than a decade, several …
substances with high intestinal absorption in human (HIA). For more than a decade, several …
Linear indices of the “molecular pseudograph's atom adjacency matrix”: definition, significance-interpretation, and application to QSAR analysis of flavone derivatives …
Y Marrero-Ponce - Journal of chemical information and computer …, 2004 - ACS Publications
This report describes a new set of molecular descriptors of relevance to QSAR/QSPR
studies and drug design, atom linear indices fk (xi). These atomic level chemical descriptors …
studies and drug design, atom linear indices fk (xi). These atomic level chemical descriptors …
Atom, atom-type and total molecular linear indices as a promising approach for bioorganic and medicinal chemistry: theoretical and experimental assessment of a …
Helminth infections are a medical problem in the world nowadays. In this paper a novel atom-
level chemical descriptor has been applied to estimate the anthelmintic activity. Total and …
level chemical descriptor has been applied to estimate the anthelmintic activity. Total and …
Multitasking models for quantitative structure–biological effect relationships: current status and future perspectives to speed up drug discovery
A Speck-Planche, MNDS Cordeiro - Expert opinion on drug …, 2015 - Taylor & Francis
Introduction: Drug discovery is the process of designing new candidate medications for the
treatment of diseases. Over many years, drugs have been identified serendipitously …
treatment of diseases. Over many years, drugs have been identified serendipitously …
[HTML][HTML] Atom, atom-type, and total linear indices of the “molecular pseudograph's atom adjacency matrix”: application to QSPR/QSAR studies of organic compounds
In this paper we describe the application in QSPR/QSAR studies of a new group of
molecular descriptors: atom, atom-type and total linear indices of the molecular …
molecular descriptors: atom, atom-type and total linear indices of the molecular …