The selection and function of cell type-specific enhancers

S Heinz, CE Romanoski, C Benner… - Nature reviews Molecular …, 2015 - nature.com
The human body contains several hundred cell types, all of which share the same genome.
In metazoans, much of the regulatory code that drives cell type-specific gene expression is …

[HTML][HTML] Niche signals and transcription factors involved in tissue-resident macrophage development

W T'Jonck, M Guilliams, J Bonnardel - Cellular immunology, 2018 - Elsevier
Tissue-resident macrophages form an essential part of the first line of defense in all tissues
of the body. Next to their immunological role, they play an important role in maintaining …

[HTML][HTML] Effect of natural genetic variation on enhancer selection and function

S Heinz, CE Romanoski, C Benner, KA Allison… - Nature, 2013 - nature.com
The mechanisms by which genetic variation affects transcription regulation and phenotypes
at the nucleotide level are incompletely understood. Here we use natural genetic variation …

[HTML][HTML] PU. 1 controls fibroblast polarization and tissue fibrosis

T Wohlfahrt, S Rauber, S Uebe, M Luber, A Soare… - Nature, 2019 - nature.com
Fibroblasts are polymorphic cells with pleiotropic roles in organ morphogenesis, tissue
homeostasis and immune responses. In fibrotic diseases, fibroblasts synthesize abundant …

The macrophage IRF8/IRF1 regulome is required for protection against infections and is associated with chronic inflammation

D Langlais, LB Barreiro, P Gros - Journal of Experimental Medicine, 2016 - rupress.org
IRF8 and IRF1 are transcriptional regulators that play critical roles in the development and
function of myeloid cells, including activation of macrophages by proinflammatory signals …

Mechanisms governing the pioneering and redistribution capabilities of the non-classical pioneer PU. 1

J Minderjahn, A Schmidt, A Fuchs, R Schill… - Nature …, 2020 - nature.com
Establishing gene regulatory networks during differentiation or reprogramming requires
master or pioneer transcription factors (TFs) such as PU. 1, a prototype master TF of …

Transcriptional network dynamics in early T cell development

B Shin, SJ Chang, BW MacNabb… - Journal of Experimental …, 2024 - rupress.org
The rate at which cells enter the T cell pathway depends not only on the immigration of
hematopoietic precursors into the strong Notch signaling environment of the thymus but also …

Pharmacological restriction of genomic binding sites redirects PU. 1 pioneer transcription factor activity

SJ Taylor, J Stauber, O Bohorquez, G Tatsumi… - Nature Genetics, 2024 - nature.com
Transcription factor (TF) DNA-binding dynamics govern cell fate and identity. However, our
ability to pharmacologically control TF localization is limited. Here we leverage chemically …

Pharmacological inhibition of the transcription factor PU. 1 in leukemia

I Antony-Debré, A Paul, J Leite… - The Journal of …, 2017 - Am Soc Clin Investig
The transcription factor PU. 1 is often impaired in patients with acute myeloid leukemia
(AML). Here, we used AML cells that already had low PU. 1 levels and further inhibited PU. 1 …

Macrophages: the potent immunoregulatory innate immune cells

V Kumar - Macrophage Activation-Biology and Disease, 2019 - books.google.com
Macrophages are ubiquitously present innate immune cells in humans and animals
belonging to both invertebrates and vertebrates. These cells were first recognized by Elia …