Organic synthesis toward small-molecule probes and drugs

SL Schreiber - Proceedings of the National Academy of …, 2011 - National Acad Sciences
“Organic synthesis” is a compound-creating activity often focused on biologically active
small molecules. This special issue of PNAS explores innovations and trends in the field that …

Autosis is a Na+,K+-ATPase–regulated form of cell death triggered by autophagy-inducing peptides, starvation, and hypoxia–ischemia

Y Liu, S Shoji-Kawata, RM Sumpter Jr… - Proceedings of the …, 2013 - National Acad Sciences
A long-standing controversy is whether autophagy is a bona fide cause of mammalian cell
death. We used a cell-penetrating autophagy-inducing peptide, Tat-Beclin 1, derived from …

[HTML][HTML] Systematic quantification of population cell death kinetics in mammalian cells

GC Forcina, M Conlon, A Wells, JY Cao, SJ Dixon - Cell systems, 2017 - cell.com
Cytotoxic compounds are important drugs and research tools. Here, we introduce a method,
scalable time-lapse analysis of cell death kinetics (STACK), to quantify the kinetics of …

Facilitating the use of large-scale biological data and tools in the era of translational bioinformatics

I Kouskoumvekaki, N Shublaq… - Briefings in …, 2014 - academic.oup.com
As both the amount of generated biological data and the processing compute power
increase, computational experimentation is no longer the exclusivity of bioinformaticians, but …

Selective modulation of autophagy, innate immunity, and adaptive immunity by small molecules

SY Shaw, K Tran, AB Castoreno… - ACS chemical …, 2013 - ACS Publications
Autophagy is an evolutionarily conserved catabolic process that directs cytoplasmic
proteins, organelles and microbes to lysosomes for degradation. Autophagy acts at the …

[HTML][HTML] Human genetics in rheumatoid arthritis guides a high-throughput drug screen of the CD40 signaling pathway

G Li, D Diogo, D Wu, J Spoonamore, V Dancik… - PLoS …, 2013 - journals.plos.org
Although genetic and non-genetic studies in mouse and human implicate the CD40 pathway
in rheumatoid arthritis (RA), there are no approved drugs that inhibit CD40 signaling for …

Integrating phenotypic small-molecule profiling and human genetics: the next phase in drug discovery

CM Johannessen, PA Clemons, BK Wagner - Trends in Genetics, 2015 - cell.com
Over the past decade, tremendous progress in high-throughput small molecule-screening
methods has facilitated the rapid expansion of phenotype-based data. Parallel advances in …

Methods and compounds for reducing intracellular lipid storage

S Wu - US Patent 9,393,221, 2016 - Google Patents
Compounds and compositions for reducing intracellular lipid accumulation in a cell are
described herein. These com pounds are useful for the treatment and prevention of …

Closing the 'phenotype gap'in precision medicine: improving what we measure to understand complex disease mechanisms

CA MacRae - Mammalian Genome, 2019 - Springer
The central concept underlying precision medicine is a mechanistic understanding of each
disease and its response to therapy sufficient to direct a specific intervention. To execute on …

Phenotyping patient-derived cells for translational studies in cardiovascular disease

SY Shaw, AD Brettman - Circulation, 2011 - Am Heart Assoc
Studies of the genetics of cardiovascular disease and its risk factors have identified many
chromosomal loci that contribute to cardiovascular traits. When combining the outcomes of …