Fungi in aquatic ecosystems

HP Grossart, S Van den Wyngaert, M Kagami… - Nature Reviews …, 2019 - nature.com
Fungi are phylogenetically and functionally diverse ubiquitous components of almost all
ecosystems on Earth, including aquatic environments stretching from high montane lakes …

Mini‐review: Phytoplankton‐derived polysaccharides in the marine environment and their interactions with heterotrophic bacteria

M Mühlenbruch, HP Grossart… - Environmental …, 2018 - Wiley Online Library
Within the wealth of molecules constituting marine dissolved organic matter, carbohydrates
make up the largest coherent and quantifiable fraction. Their main sources are from primary …

Linking metagenomics to aquatic microbial ecology and biogeochemical cycles

HP Grossart, R Massana, KD McMahon… - Limnology and …, 2020 - Wiley Online Library
Microbial communities are essential components of aquatic ecosystems through their
contribution to food web dynamics and biogeochemical processes. Aquatic microbial …

Metatranscriptomic and comparative genomic insights into resuscitation mechanisms during enrichment culturing

DS Mu, QY Liang, XM Wang, DC Lu, MJ Shi, GJ Chen… - Microbiome, 2018 - Springer
Background The pure culture of prokaryotes remains essential to elucidating the role of
these organisms. Scientists have reasoned that hard to cultivate microorganisms might grow …

Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions

N García-García, J Tamames, AM Linz… - The ISME …, 2019 - academic.oup.com
Microdiversity can lead to different ecotypes within the same species. These are assumed to
provide stability in time and space to those species. However, the role of microdiversity in …

Adaptive genetic traits in pelagic freshwater microbes

MC Chiriac, M Haber… - Environmental …, 2023 - Wiley Online Library
Pelagic microbes have adopted distinct strategies to inhabit the pelagial of lakes and
oceans and can be broadly categorized in two groups: free‐living, specialized oligotrophs …

Updated virophage taxonomy and distinction from polinton-like viruses

S Roux, MG Fischer, T Hackl, LA Katz, F Schulz… - Biomolecules, 2023 - mdpi.com
Virophages are small dsDNA viruses that hijack the machinery of giant viruses during the co-
infection of a protist (ie, microeukaryotic) host and represent an exceptional case of …

Microbiome of the deep Lake Baikal, a unique oxic bathypelagic habitat

PJ Cabello‐Yeves, TI Zemskaya… - Limnology and …, 2020 - Wiley Online Library
Lake Baikal is the deepest lake in the world. Its depth provides the only bathypelagic (>
1000 m deep) freshwater habitat on Earth and its oxic, ultra‐oligotrophic features make it a …

Heme auxotrophy in abundant aquatic microbial lineages

S Kim, I Kang, JW Lee, CO Jeon… - Proceedings of the …, 2021 - National Acad Sciences
Heme, a porphyrin ring complexed with iron, is a metalloprosthetic group of numerous
proteins involved in diverse metabolic and respiratory processes across all domains of life …

Metabolically cohesive microbial consortia and ecosystem functioning

A Pascual-García, S Bonhoeffer… - … Transactions of the …, 2020 - royalsocietypublishing.org
Recent theory and experiments have reported a reproducible tendency for the coexistence
of microbial species under controlled environmental conditions. This observation has been …