Crop breeding chips and genotyping platforms: progress, challenges, and perspectives
There is a rapidly rising trend in the development and application of molecular marker
assays for gene mapping and discovery in field crops and trees. Thus far, more than 50 SNP …
assays for gene mapping and discovery in field crops and trees. Thus far, more than 50 SNP …
The domestication and evolutionary ecology of apples
The cultivated apple is a major fruit crop in temperate zones. Its wild relatives, distributed
across temperate Eurasia and growing in diverse habitats, represent potentially useful …
across temperate Eurasia and growing in diverse habitats, represent potentially useful …
15 years of GDR: New data and functionality in the Genome Database for Rosaceae
S Jung, T Lee, CH Cheng, K Buble… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Genome Database for Rosaceae (GDR, https://www. rosaceae. org) is an
integrated web-based community database resource providing access to publicly available …
integrated web-based community database resource providing access to publicly available …
LinkImpute: fast and accurate genotype imputation for nonmodel organisms
Obtaining genome-wide genotype data from a set of individuals is the first step in many
genomic studies, including genome-wide association and genomic selection. All genotyping …
genomic studies, including genome-wide association and genomic selection. All genotyping …
Development and evaluation of SoySNP50K, a high-density genotyping array for soybean
The objective of this research was to identify single nucleotide polymorphisms (SNPs) and to
develop an Illumina Infinium BeadChip that contained over 50,000 SNPs from soybean …
develop an Illumina Infinium BeadChip that contained over 50,000 SNPs from soybean …
SNP discovery through next-generation sequencing and its applications
S Kumar, TW Banks, S Cloutier - Crop Breeding, 2016 - taylorfrancis.com
Molecular markers are widely used in plant genetic research and breeding. Single
Nucleotide Polymorphisms (SNPs) are currently the marker of choice due to their large …
Nucleotide Polymorphisms (SNPs) are currently the marker of choice due to their large …
The Draft Genome Sequence of European Pear (Pyrus communis L. 'Bartlett')
We present a draft assembly of the genome of European pear (Pyrus communis)'Bartlett'.
Our assembly was developed employing second generation sequencing technology (Roche …
Our assembly was developed employing second generation sequencing technology (Roche …
An ancient duplication of apple MYB transcription factors is responsible for novel red fruit-flesh phenotypes
Anthocyanin accumulation is coordinated in plants by a number of conserved transcription
factors. In apple (Malus× domestica), an R2R3 MYB transcription factor has been shown to …
factors. In apple (Malus× domestica), an R2R3 MYB transcription factor has been shown to …
Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)
High-density SNP arrays for genome-wide assessment of allelic variation have made high
resolution genetic characterization of crop germplasm feasible. A medium density array for …
resolution genetic characterization of crop germplasm feasible. A medium density array for …
Breeding better cultivars, faster: applications of new technologies for the rapid deployment of superior horticultural tree crops
S van Nocker, SE Gardiner - Horticulture Research, 2014 - academic.oup.com
Woody perennial plants, including trees that produce fruits and nuts of horticultural value,
typically have long breeding cycles, and development and introduction of improved cultivars …
typically have long breeding cycles, and development and introduction of improved cultivars …