Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA

DJ Funk, KE Omland - Annual Review of Ecology, Evolution …, 2003 - annualreviews.org
▪ Abstract Many uses of gene trees implicitly assume that nominal species are monophyletic
in their alleles at the study locus. However, in well-sampled gene trees, certain alleles in one …

Troubleshooting molecular phylogenetic analyses

MJ Sanderson, HB Shaffer - Annual review of ecology and …, 2002 - annualreviews.org
▪ Abstract The number, size, and scope of phylogenetic analyses using molecular data has
increased steadily in recent years. This has simultaneously led to a dramatic improvement in …

An update of Wallace's zoogeographic regions of the world

BG Holt, JP Lessard, MK Borregaard, SA Fritz… - Science, 2013 - science.org
Modern attempts to produce biogeographic maps focus on the distribution of species, and
the maps are typically drawn without phylogenetic considerations. Here, we generate a …

[图书][B] Bird coloration

GE Hill, KJ McGraw - 2006 - books.google.com
One cannot help being struck with wonder at the vivid pink of 10,000 flamingos rising from
Lake Nakuru or the glowing red gorget of a ruby-throated hummingbird feeding outside the …

Non-random coextinctions in phylogenetically structured mutualistic networks

EL Rezende, JE Lavabre, PR Guimarães, P Jordano… - Nature, 2007 - nature.com
The interactions between plants and their animal pollinators and seed dispersers have
moulded much of Earth's biodiversity,,. Recently, it has been shown that these mutually …

[PDF][PDF] A unified concept of species and its consequences for the future of taxonomy

K de Queiroz - Proceedings of the California Academy of Sciences, 2005 - repository.si.edu
Contemporary species concepts are diverse. Nonetheless, all share the fundamental idea
that species are segments of Uneages at the population level of biological organization …

Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record

E Park, DS Hwang, JS Lee, JI Song, TK Seo… - Molecular phylogenetics …, 2012 - Elsevier
The phylum Cnidaria is comprised of remarkably diverse and ecologically significant taxa,
such as the reef-forming corals, and occupies a basal position in metazoan evolution. The …

Divergent timing and patterns of species accumulation in lowland and highland neotropical birds

JT Weir - Evolution, 2006 - Wiley Online Library
Abstract Late Pliocene and Pleistocene climatic instability has been invoked to explain the
buildup of Neotropical biodiversity, although other theories date Neotropical diversification …

The West Indies as a laboratory of biogeography and evolution

R Ricklefs, E Bermingham - … Transactions of the Royal …, 2008 - royalsocietypublishing.org
Islands have long provided material and inspiration for the study of evolution and ecology.
The West Indies are complex historically and geographically, providing a rich backdrop for …

New mitochondrial DNA data affirm the importance of Pleistocene speciation in North American birds

NK Johnson, C Cicero - Evolution, 2004 - Wiley Online Library
The timing of origin of modern North American bird species in relation to Pleistocene
glaciations has long been the topic of significant discussion and disagreement. Recently …