Species-level paraphyly and polyphyly: frequency, causes, and consequences, with insights from animal mitochondrial DNA
▪ Abstract Many uses of gene trees implicitly assume that nominal species are monophyletic
in their alleles at the study locus. However, in well-sampled gene trees, certain alleles in one …
in their alleles at the study locus. However, in well-sampled gene trees, certain alleles in one …
Troubleshooting molecular phylogenetic analyses
MJ Sanderson, HB Shaffer - Annual review of ecology and …, 2002 - annualreviews.org
▪ Abstract The number, size, and scope of phylogenetic analyses using molecular data has
increased steadily in recent years. This has simultaneously led to a dramatic improvement in …
increased steadily in recent years. This has simultaneously led to a dramatic improvement in …
An update of Wallace's zoogeographic regions of the world
Modern attempts to produce biogeographic maps focus on the distribution of species, and
the maps are typically drawn without phylogenetic considerations. Here, we generate a …
the maps are typically drawn without phylogenetic considerations. Here, we generate a …
Non-random coextinctions in phylogenetically structured mutualistic networks
The interactions between plants and their animal pollinators and seed dispersers have
moulded much of Earth's biodiversity,,. Recently, it has been shown that these mutually …
moulded much of Earth's biodiversity,,. Recently, it has been shown that these mutually …
[PDF][PDF] A unified concept of species and its consequences for the future of taxonomy
K de Queiroz - Proceedings of the California Academy of Sciences, 2005 - repository.si.edu
Contemporary species concepts are diverse. Nonetheless, all share the fundamental idea
that species are segments of Uneages at the population level of biological organization …
that species are segments of Uneages at the population level of biological organization …
Estimation of divergence times in cnidarian evolution based on mitochondrial protein-coding genes and the fossil record
The phylum Cnidaria is comprised of remarkably diverse and ecologically significant taxa,
such as the reef-forming corals, and occupies a basal position in metazoan evolution. The …
such as the reef-forming corals, and occupies a basal position in metazoan evolution. The …
Divergent timing and patterns of species accumulation in lowland and highland neotropical birds
JT Weir - Evolution, 2006 - Wiley Online Library
Abstract Late Pliocene and Pleistocene climatic instability has been invoked to explain the
buildup of Neotropical biodiversity, although other theories date Neotropical diversification …
buildup of Neotropical biodiversity, although other theories date Neotropical diversification …
The West Indies as a laboratory of biogeography and evolution
R Ricklefs, E Bermingham - … Transactions of the Royal …, 2008 - royalsocietypublishing.org
Islands have long provided material and inspiration for the study of evolution and ecology.
The West Indies are complex historically and geographically, providing a rich backdrop for …
The West Indies are complex historically and geographically, providing a rich backdrop for …
New mitochondrial DNA data affirm the importance of Pleistocene speciation in North American birds
NK Johnson, C Cicero - Evolution, 2004 - Wiley Online Library
The timing of origin of modern North American bird species in relation to Pleistocene
glaciations has long been the topic of significant discussion and disagreement. Recently …
glaciations has long been the topic of significant discussion and disagreement. Recently …