Systems biology of cancer metastasis

Y Suhail, MP Cain, K Vanaja, PA Kurywchak… - Cell systems, 2019 - cell.com
Cancer metastasis is no longer viewed as a linear cascade of events but rather as a series
of concurrent, partially overlapping processes, as successfully metastasizing cells assume …

Antigen retrieval immunohistochemistry: review and future prospects in research and diagnosis over two decades

SR Shi, Y Shi, CR Taylor - Journal of Histochemistry & …, 2011 - journals.sagepub.com
As a review for the 20th anniversary of publishing the antigen retrieval (AR) technique in this
journal, the authors intend briefly to summarize developments in AR-immunohistochemistry …

High-throughput proteomic sample preparation using pressure cycling technology

X Cai, Z Xue, C Wu, R Sun, L Qian, L Yue, W Ge, X Yi… - Nature …, 2022 - nature.com
High-throughput lysis and proteolytic digestion of biopsy-level tissue specimens is a major
bottleneck for clinical proteomics. Here we describe a detailed protocol of pressure cycling …

Identifying and quantifying proteolytic events and the natural N terminome by terminal amine isotopic labeling of substrates

O Kleifeld, A Doucet, A Prudova, M Gioia… - Nature protocols, 2011 - nature.com
Abstract Analysis of the sequence and nature of protein N termini has many applications.
Defining the termini of proteins for proteome annotation in the Human Proteome Project is of …

WNT signaling regulates self-renewal and differentiation of prostate cancer cells with stem cell characteristics

I Bisson, DM Prowse - Cell research, 2009 - nature.com
Prostate cancer cells with stem cell characteristics were identified in human prostate cancer
cell lines by their ability to form from single cells self-renewing prostaspheres in non …

Highthroughput proteomic analysis of formalinfixed paraffinembedded tissue microarrays using MALDI imaging mass spectrometry

MR Groseclose, PP Massion, P Chaurand… - …, 2008 - Wiley Online Library
A novel method for highthroughput proteomic analysis of formalinfixed paraffinembedded
(FFPE) tissue microarrays (TMA) is described using ontissue tryptic digestion followed by …

[HTML][HTML] Equivalence of protein inventories obtained from formalin-fixed paraffin-embedded and frozen tissue in multidimensional liquid chromatography-tandem mass …

RW Sprung Jr, JWC Brock, JP Tanksley, M Li… - Molecular & Cellular …, 2009 - Elsevier
Formalin-fixed paraffin-embedded (FFPE) tissue specimens comprise a potentially valuable
resource for retrospective biomarker discovery studies, and recent work indicates the …

Discovery and validation of graft-versus-host disease biomarkers

S Paczesny - Blood, The Journal of the American Society of …, 2013 - ashpublications.org
Allogeneic hematopoietic stem cell transplantation (allo-HSCT) is the most effective tumor
immunotherapy available. Although allo-HSCT provides beneficial graft-versus-tumor …

Biobanks: transnational, European and global networks

M Asslaber, K Zatloukal - Briefings in functional genomics and …, 2007 - academic.oup.com
Biobanks contain biological samples and associated information that are essential raw
materials for advancement of biotechnology, human health, and research and development …

Plasma membrane proteomics and its application in clinical cancer biomarker discovery

R Leth-Larsen, RR Lund, HJ Ditzel - Molecular & Cellular Proteomics, 2010 - ASBMB
Plasma membrane proteins that are exposed on the cell surface have important biological
functions, such as signaling into and out of the cells, ion transport, and cell-cell and cell …