Soil microbial biogeography in a changing world: recent advances and future perspectives

H Chu, GF Gao, Y Ma, K Fan, M Delgado-Baquerizo - MSystems, 2020 - Am Soc Microbiol
Soil microbial communities are fundamental to maintaining key soil processes associated
with litter decomposition, nutrient cycling, and plant productivity and are thus integral to …

K-selection as microbial community management strategy: a method for improved viability of larvae in aquaculture

O Vadstein, KJK Attramadal, I Bakke… - Frontiers in …, 2018 - frontiersin.org
Aquaculture has the potential to become a major food supplier in a world with an increasing
human population, and increased consumption of fish will likely have positive health …

Decoupling function and taxonomy in the global ocean microbiome

S Louca, LW Parfrey, M Doebeli - Science, 2016 - science.org
Microbial metabolism powers biogeochemical cycling in Earth's ecosystems. The taxonomic
composition of microbial communities varies substantially between environments, but the …

The future of origin of life research: bridging decades-old divisions

M Preiner, S Asche, S Becker, HC Betts, A Boniface… - Life, 2020 - mdpi.com
Research on the origin of life is highly heterogeneous. After a peculiar historical
development, it still includes strongly opposed views which potentially hinder progress. In …

[图书][B] Predictive microbiology in foods

F Perez-Rodriguez, A Valero, F Pérez-Rodríguez… - 2013 - Springer
Predictive microbiology in foods is a research area within food microbiology intended to
provide mathematical models to predict microbial behavior in food environments. Although …

Mathematical modeling of primary succession of murine intestinal microbiota

S Marino, NT Baxter, GB Huffnagle… - Proceedings of the …, 2014 - National Acad Sciences
Understanding the nature of interpopulation interactions in host-associated microbial
communities is critical to understanding gut colonization, responses to perturbations, and …

Mathematical modeling of microbial community dynamics: a methodological review

HS Song, WR Cannon, AS Beliaev, A Konopka - Processes, 2014 - mdpi.com
Microorganisms in nature form diverse communities that dynamically change in structure
and function in response to environmental variations. As a complex adaptive system …

Season, Irrigation, Leaf Age, and Escherichia coli Inoculation Influence the Bacterial Diversity in the Lettuce Phyllosphere

TR Williams, AL Moyne, LJ Harris, ML Marco - PloS one, 2013 - journals.plos.org
The developmental and temporal succession patterns and disturbance responses of
phyllosphere bacterial communities are largely unknown. These factors might influence the …

Microbial ecology and evolution in the acid mine drainage model system

LN Huang, JL Kuang, WS Shu - Trends in microbiology, 2016 - cell.com
Acid mine drainage (AMD) is a unique ecological niche for acid-and toxic-metals-adapted
microorganisms. These low-complexity systems offer a special opportunity for the ecological …

Automated generation of genome-scale metabolic draft reconstructions based on KEGG

E Karlsen, C Schulz, E Almaas - BMC bioinformatics, 2018 - Springer
Background Constraint-based modeling is a widely used and powerful methodology to
assess the metabolic phenotypes and capabilities of an organism. The starting point and …