Mycobiome diversity: high-throughput sequencing and identification of fungi
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
Perspectives and benefits of high-throughput long-read sequencing in microbial ecology
Short-read, high-throughput sequencing (HTS) methods have yielded numerous important
insights into microbial ecology and function. Yet, in many instances short-read HTS …
insights into microbial ecology and function. Yet, in many instances short-read HTS …
Soil microbiome indicators can predict crop growth response to large-scale inoculation with arbuscular mycorrhizal fungi
Alternative solutions to mineral fertilizers and pesticides that reduce the environmental
impact of agriculture are urgently needed. Arbuscular mycorrhizal fungi (AMF) can enhance …
impact of agriculture are urgently needed. Arbuscular mycorrhizal fungi (AMF) can enhance …
Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots
Root-associated microbes play a key role in plant performance and productivity, making
them important players in agroecosystems. So far, very few studies have assessed the …
them important players in agroecosystems. So far, very few studies have assessed the …
High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution
BJ Callahan, J Wong, C Heiner, S Oh… - Nucleic acids …, 2019 - academic.oup.com
Targeted PCR amplification and high-throughput sequencing (amplicon sequencing) of 16S
rRNA gene fragments is widely used to profile microbial communities. New long-read …
rRNA gene fragments is widely used to profile microbial communities. New long-read …
Biotic homogenization, lower soil fungal diversity and fewer rare taxa in arable soils across Europe
Soil fungi are a key constituent of global biodiversity and play a pivotal role in
agroecosystems. How arable farming affects soil fungal biogeography and whether it has a …
agroecosystems. How arable farming affects soil fungal biogeography and whether it has a …
Global evaluation of commercial arbuscular mycorrhizal inoculants under greenhouse and field conditions
MJ Salomon, R Demarmels, SJ Watts-Williams… - Applied Soil …, 2022 - Elsevier
Arbuscular mycorrhizal fungi (AMF) are plant symbionts that promote plant growth and
provide important plant and ecosystem functions. These abilities have great economical …
provide important plant and ecosystem functions. These abilities have great economical …
Response and interaction of Bradyrhizobium japonicum and arbuscular mycorrhizal fungi in the soybean rhizosphere
Regulatory response and interaction of Bradyrhizobium and arbuscular mycorrhizal fungi
(AMF) play a vital role in rhizospheric soil processes and productivity of soybean (Glycine …
(AMF) play a vital role in rhizospheric soil processes and productivity of soybean (Glycine …
PacBio metabarcoding of Fungi and other eukaryotes: errors, biases and perspectives
L Tedersoo, A Tooming‐Klunderud… - New Phytologist, 2018 - Wiley Online Library
Second‐generation, high‐throughput sequencing methods have greatly improved our
understanding of the ecology of soil microorganisms, yet the short barcodes (< 500 bp) …
understanding of the ecology of soil microorganisms, yet the short barcodes (< 500 bp) …
Arbuscular mycorrhizal fungi and their response to pesticides
K Hage‐Ahmed, K Rosner… - Pest management …, 2019 - Wiley Online Library
Arbuscular mycorrhizal fungi (AMF) form symbioses with the majority of plant species and
can provide multiple benefits to the host plant. In agro‐ecosystems, the abundance and …
can provide multiple benefits to the host plant. In agro‐ecosystems, the abundance and …