Computational models for active matter
Active matter, which ranges from molecular motors to groups of animals, exists at different
length scales and timescales, and various computational models have been proposed to …
length scales and timescales, and various computational models have been proposed to …
Soft matter models of developing tissues and tumors
D Gonzalez-Rodriguez, K Guevorkian, S Douezan… - Science, 2012 - science.org
Analogies with inert soft condensed matter—such as viscoelastic liquids, pastes, foams,
emulsions, colloids, and polymers—can be used to investigate the mechanical response of …
emulsions, colloids, and polymers—can be used to investigate the mechanical response of …
Simulating tissue mechanics with agent-based models: concepts, perspectives and some novel results
P Van Liedekerke, MM Palm, N Jagiella… - Computational particle …, 2015 - Springer
In this paper we present an overview of agent-based models that are used to simulate
mechanical and physiological phenomena in cells and tissues, and we discuss underlying …
mechanical and physiological phenomena in cells and tissues, and we discuss underlying …
Nonlinear modelling of cancer: bridging the gap between cells and tumours
Despite major scientific, medical and technological advances over the last few decades, a
cure for cancer remains elusive. The disease initiation is complex, and including initiation …
cure for cancer remains elusive. The disease initiation is complex, and including initiation …
Rigidity transitions in development and disease
E Hannezo, CP Heisenberg - Trends in Cell Biology, 2022 - cell.com
Although rigidity and jamming transitions have been widely studied in physics and material
science, their importance in a number of biological processes, including embryo …
science, their importance in a number of biological processes, including embryo …
A review of mathematical models for the formation of vascular networks
M Scianna, CG Bell, L Preziosi - Journal of theoretical biology, 2013 - Elsevier
Two major mechanisms are involved in the formation of blood vasculature: vasculogenesis
and angiogenesis. The former term describes the formation of a capillary-like network from …
and angiogenesis. The former term describes the formation of a capillary-like network from …
Phase-field modeling of fatigue coupled to cyclic plasticity in an energetic formulation
This paper presents a modeling framework to describe the driving mechanisms of cyclic
failure in brittle and ductile materials, including cyclic plasticity and fatigue crack growth. A …
failure in brittle and ductile materials, including cyclic plasticity and fatigue crack growth. A …
Building a tissue: mesenchymal and epithelial cell spheroids mechanical properties at micro-and nanoscale
NV Kosheleva, YM Efremov, PI Koteneva, IV Ilina… - Acta Biomaterialia, 2023 - Elsevier
Cell transitions between the epithelial and mesenchymal phenotypes provide the regulated
morphogenesis and regeneration throughout the ontogenesis. The tissue mechanics and …
morphogenesis and regeneration throughout the ontogenesis. The tissue mechanics and …
Viscoelastic properties in cancer: From cells to spheroids
Y Abidine, A Giannetti, J Revilloud, VM Laurent… - Cells, 2021 - mdpi.com
AFM-based rheology methods enable the investigation of the viscoelastic properties of
cancer cells. Such properties are known to be essential for cell functions, especially for …
cancer cells. Such properties are known to be essential for cell functions, especially for …
Effective governing equations for poroelastic growing media
A new mathematical model is developed for the macroscopic behaviour of a porous, linear
elastic solid, saturated with a slowly flowing incompressible, viscous fluid, with surface …
elastic solid, saturated with a slowly flowing incompressible, viscous fluid, with surface …