The state of the art in the analysis of two-dimensional gel electrophoresis images

M Berth, FM Moser, M Kolbe, J Bernhardt - Applied microbiology and …, 2007 - Springer
Software-based image analysis is a crucial step in the biological interpretation of two-
dimensional gel electrophoresis experiments. Recent significant advances in image …

Difference gel electrophoresis

JF Timms, R Cramer - Proteomics, 2008 - Wiley Online Library
DIGE is a protein labelling and separation technique allowing quantitative proteomics of two
or more samples by optical fluorescence detection of differentially labelled proteins that are …

Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ)

CS Gan, PK Chong, TK Pham… - Journal of proteome …, 2007 - ACS Publications
We assess the reliability of isobaric-tags for relative and absolute quantitation (iTRAQ),
based on different types of replicate analyses taking into account technical, experimental …

Guidelines for the next 10 years of proteomics

MR Wilkins, RD Appel, JE Van Eyk, MCM Chung… - …, 2006 - Wiley Online Library
In the last ten years, the field of proteomics has expanded at a rapid rate. A range of exciting
new technology has been developed and enthusiastically applied to an enormous variety of …

Protein stains for proteomic applications: Which, when, why?

I Miller, J Crawford, E Gianazza - Proteomics, 2006 - Wiley Online Library
This review recollects literature data on sensitivity and dynamic range for the most
commonly used colorimetric and fluorescent dyes for general protein staining, and …

Green and red fluorescent dyes for translational applications in imaging and sensing analytes: A dual‐color flag

E Oliveira, E Bértolo, C Núñez, V Pilla… - …, 2018 - Wiley Online Library
Red and green are two of the most‐preferred colors from the entire chromatic spectrum, and
red and green dyes are widely used in biochemistry, immunohistochemistry, immune …

2DE: the phoenix of proteomics

BM Oliveira, JR Coorssen, D Martins-de-Souza - Journal of proteomics, 2014 - Elsevier
Given the rapid developments in mass spectrometry (MS) in terms of sensitivity, mass
accuracy, and throughput, some have suggested that two-dimensional gel electrophoresis …

Proteomics technologies for the global identification and quantification of proteins

IA Brewis, P Brennan - Advances in protein chemistry and structural biology, 2010 - Elsevier
This review provides an introduction for the nonspecialist to proteomics and in particular the
major approaches available for global protein identification and quantification. Proteomics …

Back to the basics: maximizing the information obtained by quantitative two dimensional gel electrophoresis analyses by an appropriate experimental design and …

L Valledor, J Jorrín - Journal of proteomics, 2011 - Elsevier
Two dimensional gel electrophoresis has been one of the techniques most used for protein
separation in proteomics experiments and still continues to be so for some species such as …

Two-dimensional difference gel electrophoresis

S Viswanathan, M Ünlü, JS Minden - Nature protocols, 2006 - nature.com
Two-dimensional difference gel electrophoresis (2D DIGE) is a modified form of 2D
electrophoresis (2DE) that allows one to compare two or three protein samples …