Restricting retrotransposons: a review

JL Goodier - Mobile DNA, 2016 - Springer
Retrotransposons have generated about 40% of the human genome. This review examines
the strategies the cell has evolved to coexist with these genomic “parasites”, focussing on …

The influence of LINE‐1 and SINE retrotransposons on mammalian genomes

SR Richardson, AJ Doucet, HC Kopera… - Mobile DNA …, 2015 - Wiley Online Library
Transposable elements (TEs) or “jumping genes” historically have been disparaged as a
class of “junk DNA” in mammalian genomes (1, 2). The advent of whole genome DNA …

ADAR1 masks the cancer immunotherapeutic promise of ZBP1-driven necroptosis

T Zhang, C Yin, A Fedorov, L Qiao, H Bao… - Nature, 2022 - nature.com
Only a small proportion of patients with cancer show lasting responses to immune
checkpoint blockade (ICB)-based monotherapies. The RNA-editing enzyme ADAR1 is an …

LINE1 derepression in aged wild-type and SIRT6-deficient mice drives inflammation

M Simon, M Van Meter, J Ablaeva, Z Ke, RS Gonzalez… - Cell metabolism, 2019 - cell.com
Mice deficient for SIRT6 exhibit a severely shortened lifespan, growth retardation, and highly
elevated LINE1 (L1) activity. Here we report that SIRT6-deficient cells and tissues …

Single-cell analysis of chromatin accessibility in the adult mouse brain

S Zu, YE Li, K Wang, EJ Armand, S Mamde, ML Amaral… - Nature, 2023 - nature.com
Recent advances in single-cell technologies have led to the discovery of thousands of brain
cell types; however, our understanding of the gene regulatory programs in these cell types is …

LINE-1 activation after fertilization regulates global chromatin accessibility in the early mouse embryo

JW Jachowicz, X Bing, J Pontabry, A Bošković… - Nature …, 2017 - nature.com
After fertilization, to initiate development, gametes are reprogramed to become totipotent.
Approximately half of the mammalian genome consists of repetitive elements, including …

[HTML][HTML] Transposable elements become active and mobile in the genomes of aging mammalian somatic tissues

M De Cecco, SW Criscione, AL Peterson… - Aging (Albany …, 2013 - ncbi.nlm.nih.gov
Transposable elements (TEs) were discovered by Barbara McClintock in maize and have
since been found to be ubiquitous in all living organisms. Transposition is mutagenic and …

LINE-1 regulates cortical development by acting as long non-coding RNAs

D Mangoni, A Simi, P Lau, A Armaos… - Nature …, 2023 - nature.com
Abstract Long Interspersed Nuclear Elements-1s (L1s) are transposable elements that
constitute most of the genome's transcriptional output yet have still largely unknown …

Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity

T Dahlet, A Argüeso Lleida, H Al Adhami… - Nature …, 2020 - nature.com
Mouse embryos acquire global DNA methylation of their genome during implantation.
However the exact roles of DNA methyltransferases (DNMTs) in embryos have not been …

Asymmetric distribution of parental H3K9me3 in S phase silences L1 elements

Z Li, S Duan, X Hua, X Xu, Y Li, D Menolfi, H Zhou… - Nature, 2023 - nature.com
In eukaryotes, repetitive DNA sequences are transcriptionally silenced through histone H3
lysine 9 trimethylation (H3K9me3). Loss of silencing of the repeat elements leads to genome …