Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation

SP Flanagan, BR Forester, EK Latch… - Evolutionary …, 2018 - Wiley Online Library
Identifying and monitoring locally adaptive genetic variation can have direct utility for
conserving species at risk, especially when management may include actions such as …

Detecting signatures of positive selection in non-model species using genomic data

H Weigand, F Leese - Zoological journal of the Linnean Society, 2018 - academic.oup.com
Understanding how natural selection shapes genetic variation in populations is of
paramount importance in evolutionary biology. Affordable high-throughput sequencing now …

The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights

C Shao, S Sun, K Liu, J Wang, S Li, Q Liu, BE Deagle… - Cell, 2023 - cell.com
Antarctic krill (Euphausia superba) is Earth's most abundant wild animal, and its enormous
biomass is vital to the Southern Ocean ecosystem. Here, we report a 48.01-Gb chromosome …

Evolutionary genomics of a subdivided species

T Maruki, Z Ye, M Lynch - Molecular biology and evolution, 2022 - academic.oup.com
The ways in which genetic variation is distributed within and among populations is a key
determinant of the evolutionary features of a species. However, most comprehensive studies …

Genome architecture and diverged selection shaping pattern of genomic differentiation in wild barley

W Zhang, C Tan, H Hu, R Pan, Y Xiao… - Plant biotechnology …, 2023 - Wiley Online Library
Divergent selection of populations in contrasting environments leads to functional genomic
divergence. However, the genomic architecture underlying heterogeneous genomic …

Population Genetic Diversity and Structure of Ancient Tree Populations of Cryptomeria japonica var. sinensis Based on RAD-seq Data

M Cai, Y Wen, K Uchiyama, Y Onuma, Y Tsumura - Forests, 2020 - mdpi.com
Research highlights: Our study is the first to explore the genetic composition of ancient
Cryptomeria trees across a distribution range in China. Background and objectives …

Genotyping‐by‐sequencing for biogeography

F Vaux, L Dutoit, CI Fraser… - Journal of Biogeography, 2023 - Wiley Online Library
Aim Genotyping‐by‐sequencing (GBS) and similar reduced‐representation sequencing
methods, such as restriction site‐associated DNA sequencing (RADseq), have been …

[HTML][HTML] Hardy-Weinberg Equilibrium in Meta-Analysis Studies and Large-Scale Genomic Sequencing Era

H Neamatzadeh, SA Dastgheib… - … Pacific journal of …, 2024 - pmc.ncbi.nlm.nih.gov
The Hardy-Weinberg Equilibrium (HWE) is a fundamental principle employed in the analysis
of genetic data, encompassing studies of meta-analysis and genomic sequencing. It has …

Use of genomic resources to assess adaptive divergence and introgression in oaks

D Lazic, AL Hipp, JE Carlson, O Gailing - Forests, 2021 - mdpi.com
Adaptive divergence is widely accepted as a contributor to speciation and the maintenance
of species integrity. However, the mechanisms leading to reproductive isolation, the genes …

Genome-wide SNP analysis to assess the genetic population structure and diversity of Acrocomia species

BG Díaz, MI Zucchi, A Alves‐Pereira, CP de Almeida… - PLoS …, 2021 - journals.plos.org
Acrocomia (Arecaceae) is a genus widely distributed in tropical and subtropical America that
has been achieving economic interest due to the great potential of oil production of some of …