Non‐gene‐editing microbiome engineering of spontaneous food fermentation microbiota—Limitation control, design control, and integration

L Chen, G Wang, M Teng, L Wang… - … Reviews in Food …, 2023 - Wiley Online Library
Non‐gene‐editing microbiome engineering (NgeME) is the rational design and control of
natural microbial consortia to perform desired functions. Traditional NgeME approaches use …

The evolution of knowledge on seafood spoilage microbiota from the 20th to the 21st century: Have we finished or just begun?

DA Anagnostopoulos, FF Parlapani… - Trends in Food Science & …, 2022 - Elsevier
Backround The modern dietary trends have led to a continuously increasing demand for
seafood. Both high quality and extended shelf-life of seafood is required to satisfy the …

[HTML][HTML] Microbial interactions shape cheese flavour formation

C Melkonian, F Zorrilla, I Kjærbølling, S Blasche… - Nature …, 2023 - nature.com
Cheese fermentation and flavour formation are the result of complex biochemical reactions
driven by the activity of multiple microorganisms. Here, we studied the roles of microbial …

Fermented-food metagenomics reveals substrate-associated differences in taxonomy and health-associated and antibiotic resistance determinants

J Leech, R Cabrera-Rubio, AM Walsh, G Macori… - …, 2020 - Am Soc Microbiol
Fermented foods have been the focus of ever greater interest as a consequence of
purported health benefits. Indeed, it has been suggested that consumption of these foods …

Integrated molecular approaches for fermented food microbiome research

AM Walsh, J Leech, C Huttenhower… - FEMS Microbiology …, 2023 - academic.oup.com
Molecular technologies, including high-throughput sequencing, have expanded our
perception of the microbial world. Unprecedented insights into the composition and function …

[HTML][HTML] Metagenomic features of traditional fermented milk products

L You, C Yang, H Jin, LY Kwok, Z Sun, H Zhang - Lwt, 2022 - Elsevier
This study analyzed the microbiomes of 23 Chinese koumiss samples using deep
metagenomic sequencing, as well as metagenome datasets of 20 nunu, 18 kefir, and 12 …

Are fermented foods an overlooked reservoir of antimicrobial resistance?

BE Wolfe - Current Opinion in Food Science, 2023 - Elsevier
Despite their many cultural, culinary, and health benefits, fermented foods may amplify and
disseminate antimicrobial resistance in our food supply. This review summarizes our current …

Geographically associated fungus-bacterium interactions contribute to the formation of geography-dependent flavor during high-complexity spontaneous fermentation

Y Tan, H Du, H Zhang, C Fang, G Jin… - Microbiology …, 2022 - Am Soc Microbiol
Fermented foods often have attractive flavor characteristics to meet various human
demands. An ever-challenging target is the production of fermented foods with equal flavor …

[HTML][HTML] Metagenomics reveals the habitat specificity of biosynthetic potential of secondary metabolites in global food fermentations

R Du, W Xiong, L Xu, Y Xu, Q Wu - Microbiome, 2023 - Springer
Background Fermented foods are considered to be beneficial for human health. Secondary
metabolites determined by biosynthetic gene clusters (BGCs) are precious bioactive …

Investigating dairy microbiome: an opportunity to ensure quality, safety and typicity

I Ferrocino, K Rantsiou, L Cocolin - Current Opinion in Biotechnology, 2022 - Elsevier
Highlights•Integration tools are needed to decipher what happens in a complex food
ecosystem.•An extensive culture based methodology is necessary to maintain microbial …