[HTML][HTML] DNA methylation: a historical perspective

AL Mattei, N Bailly, A Meissner - Trends in Genetics, 2022 - cell.com
In 1925, 5-methylcytosine was first reported in bacteria. However, its biological importance
was not intuitive for several decades. After this initial lag, the ubiquitous presence of this …

DNA methylation readers and cancer: mechanistic and therapeutic applications

N Mahmood, SA Rabbani - Frontiers in oncology, 2019 - frontiersin.org
DNA methylation is a major epigenetic process that regulates chromatin structure which
causes transcriptional activation or repression of genes in a context-dependent manner. In …

Sequence-dependent surface condensation of a pioneer transcription factor on DNA

JA Morin, S Wittmann, S Choubey, A Klosin, S Golfier… - Nature Physics, 2022 - nature.com
Biomolecular condensates are dense assemblies of proteins that form distinct biochemical
compartments without being surrounded by a membrane. Some, such as P granules and …

Circulating tumor DNA methylation profiles enable early diagnosis, prognosis prediction, and screening for colorectal cancer

H Luo, Q Zhao, W Wei, L Zheng, S Yi, G Li… - Science translational …, 2020 - science.org
Circulating tumor DNA (ctDNA) has emerged as a useful diagnostic and prognostic
biomarker in many cancers. Here, we conducted a study to investigate the potential use of …

Liquid condensation of reprogramming factor KLF4 with DNA provides a mechanism for chromatin organization

R Sharma, KJ Choi, MD Quan, S Sharma… - Nature …, 2021 - nature.com
Expression of a few master transcription factors can reprogram the epigenetic landscape
and three-dimensional chromatin topology of differentiated cells and achieve pluripotency …

[HTML][HTML] Toward a mechanistic understanding of DNA methylation readout by transcription factors

JF Kribelbauer, XJ Lu, R Rohs, RS Mann… - Journal of molecular …, 2020 - Elsevier
Epigenetic DNA modification impacts gene expression, but the underlying molecular
mechanisms are only partly understood. Adding a methyl group to a cytosine base locally …

Mechanisms controlling microRNA expression in tumor

S Chen, Y Wang, D Li, H Wang, X Zhao, J Yang… - Cells, 2022 - mdpi.com
MicroRNAs (miRNAs) are widely present in many organisms and regulate the expression of
genes in various biological processes such as cell differentiation, metabolism, and …

Molecular processes connecting DNA methylation patterns with DNA methyltransferases and histone modifications in mammalian genomes

A Jeltsch, J Broche, P Bashtrykov - Genes, 2018 - mdpi.com
DNA methylation is an essential part of the epigenome chromatin modification network,
which also comprises several covalent histone protein post-translational modifications. All …

Zinc finger readers of methylated DNA

NO Hudson, BA Buck-Koehntop - Molecules, 2018 - mdpi.com
DNA methylation is a prevalent epigenetic modification involved in regulating a number of
essential cellular processes, including genomic accessibility and transcriptional outcomes …

THOR is a targetable epigenetic biomarker with clinical implications in breast cancer

JD Apolónio, JS Dias, MT Fernandes, M Komosa… - Clinical …, 2022 - Springer
Background Breast cancer (BC) is the most frequently diagnosed cancer and a leading
cause of death among women worldwide. Early BC is potentially curable, but the mortality …