HLA and Sjögren's syndrome susceptibility. A meta-analysis of worldwide studies
P Cruz-Tapias, A Rojas-Villarraga, S Maier-Moore… - Autoimmunity …, 2012 - Elsevier
The aim of this work was to identify common HLA Class II alleles contributing to primary
Sjögren's syndrome (pSS) susceptibility worldwide and to analyze their biological …
Sjögren's syndrome (pSS) susceptibility worldwide and to analyze their biological …
A review on the methods of peptide-MHC binding prediction
Y Liu, X Ouyang, ZX Xiao, L Zhang… - Current …, 2020 - ingentaconnect.com
Background: T lymphocyte achieves an immune response by recognizing antigen peptides
(also known as T cell epitopes) through major histocompatibility complex (MHC) molecules …
(also known as T cell epitopes) through major histocompatibility complex (MHC) molecules …
pDOCK: a new technique for rapid and accurate docking of peptide ligands to Major Histocompatibility Complexes
JM Khan, S Ranganathan - Immunome Research, 2010 - Springer
Background Identification of antigenic peptide epitopes is an essential prerequisite in T cell-
based molecular vaccine design. Computational (sequence-based and structure-based) …
based molecular vaccine design. Computational (sequence-based and structure-based) …
Human leukocyte antigen (HLA) typing study identifies maternal DQ2 susceptibility alleles among infertile women: potential associations with autoimmunity and …
P Triggianese, C Perricone, E De Martino, A D'Antonio… - Nutrients, 2021 - mdpi.com
Background. The interplay between female fertility and autoimmune diseases (AIDs) can
involve HLA haplotypes and micronutrients. We analyzed the distribution of HLA-DQ2/-DQ8 …
involve HLA haplotypes and micronutrients. We analyzed the distribution of HLA-DQ2/-DQ8 …
A set of new amino acid descriptors applied in prediction of MHC class I binding peptides
G Liang, L Yang, Z Chen, H Mei, M Shu, Z Li - European journal of …, 2009 - Elsevier
A set of new amino acid descriptors, namely factor analysis scales of generalized amino
acid information (FASGAI) involving hydrophobicity, alpha and turn propensities, bulky …
acid information (FASGAI) involving hydrophobicity, alpha and turn propensities, bulky …
Methods for designing and synthesizing directed sequence polymer compositions via the directed expansion of epitope permeability
D Bonnin - US Patent 8,378,072, 2013 - Google Patents
US8378072B2 - Methods for designing and synthesizing directed sequence polymer
compositions via the directed expansion of epitope permeability - Google Patents US8378072B2 …
compositions via the directed expansion of epitope permeability - Google Patents US8378072B2 …
MHC class II binding prediction by molecular docking
M Atanasova, I Dimitrov, DR Flower… - Molecular …, 2011 - Wiley Online Library
Abstract Proteins of the Major Histocompatibility Complex (MHC) bind self and nonself
peptide antigens or epitopes within the cell and present them at the cell surface for …
peptide antigens or epitopes within the cell and present them at the cell surface for …
Bioinformatics for study of autoimmunity
N Petrovsky, V Brusic - Autoimmunity, 2006 - Taylor & Francis
Recent years have witnessed an explosive growth in available biological data pertaining to
autoimmunity research. This includes a tremendous quantity of sequence data (biological …
autoimmunity research. This includes a tremendous quantity of sequence data (biological …
Efficacy of HLA-DRB1∗ 03: 01 and H2E transgenic mouse strains to correlate pathogenic thyroglobulin epitopes for autoimmune thyroiditis
Thyroglobulin (Tg), a homodimer of 660 kD comprising 2748 amino acids, is the largest
autoantigen known. The prevalence of autoimmune thyroid disease, including Hashimoto's …
autoantigen known. The prevalence of autoimmune thyroid disease, including Hashimoto's …
Recent Advances in De Novo Protein Design
ML Bellows, HK Fung… - Process Systems …, 2010 - Wiley Online Library
De novo protein design aims at determining specific amino acid sequences that will fold into
a given three-dimensional (3D) template. This is also known as the “inverse folding …
a given three-dimensional (3D) template. This is also known as the “inverse folding …