The past, present and future of mitochondrial genomics: have we sequenced enough mtDNAs?

DR Smith - Briefings in functional genomics, 2016 - academic.oup.com
The year 2014 saw more than a thousand new mitochondrial genome sequences deposited
in GenBank—an almost 15% increase from the previous year. Hundreds of peer-reviewed …

Increasing the reach of forensic genetics with massively parallel sequencing

B Budowle, SE Schmedes, FR Wendt - Forensic Science, Medicine and …, 2017 - Springer
The field of forensic genetics has made great strides in the analysis of biological evidence
related to criminal and civil matters. More so, the discipline has set a standard of …

[HTML][HTML] Developmental validation of the ForenSeq MainstAY kit, MiSeq FGx sequencing system and ForenSeq universal analysis software

KM Stephens, R Barta, K Fleming, JC Perez… - Forensic Science …, 2023 - Elsevier
For human identification purposes, forensic genetics has primarily relied upon a core set of
autosomal (and to a lesser extent Y chromosome) short tandem repeat (STR) markers that …

Massively parallel sequencing-enabled mixture analysis of mitochondrial DNA samples

JD Churchill, M Stoljarova, JL King… - International journal of …, 2018 - Springer
The mitochondrial genome has a number of characteristics that provide useful information to
forensic investigations. Massively parallel sequencing (MPS) technologies offer …

Simultaneous whole mitochondrial genome sequencing with short overlapping amplicons suitable for degraded DNA using the ion torrent personal genome machine

L Chaitanya, A Ralf, M van Oven, T Kupiec… - Human …, 2015 - Wiley Online Library
Whole mitochondrial (mt) genome analysis enables a considerable increase in analysis
throughput, and improves the discriminatory power to the maximum possible phylogenetic …

STRait Razor v2s: Advancing sequence-based STR allele reporting and beyond to other marker systems

JL King, FR Wendt, J Sun, B Budowle - Forensic Science International …, 2017 - Elsevier
STRait Razor has provided the forensic community a free-to-use, open-source tool for short
tandem repeat (STR) analysis of massively parallel sequencing (MPS) data. STRait Razor …

A performance evaluation of Nextera XT and KAPA HyperPlus for rapid Illumina library preparation of long-range mitogenome amplicons

JD Ring, K Sturk-Andreaggi, MA Peck… - Forensic Science …, 2017 - Elsevier
Next-generation sequencing (NGS) facilitates the rapid and high-throughput generation of
human mitochondrial genome (mitogenome) data to build population and reference …

Sequencing of mitochondrial genomes using the precision ID mtDNA whole genome panel

V Pereira, A Longobardi, C Børsting - Electrophoresis, 2018 - Wiley Online Library
Massively parallel sequencing offers a fast and cost‐effective method for sequencing of the
whole mtDNA genome. The Precision ID mtDNA Whole Genome Panel amplifies the entire …

[PDF][PDF] Blind study evaluation illustrates utility of the Ion PGM™ system for use in human identity DNA typing

JD Churchill, J Chang, J Ge, N Rajagopalan… - Croatian medical …, 2015 - hrcak.srce.hr
Aim To perform a blind study to assess the capability of the Ion Personal Genome
Machine®(PGM™) system to sequence forensically relevant genetic marker panels and to …

Whole mitochondrial genome genetic diversity in an Estonian population sample

M Stoljarova, JL King, M Takahashi, A Aaspõllu… - International journal of …, 2016 - Springer
Mitochondrial DNA is a useful marker for population studies, human identification, and
forensic analysis. Commonly used hypervariable regions I and II (HVI/HVII) were reported to …