Deciphering epitranscriptome: modification of mRNA bases provides a new perspective for post-transcriptional regulation of gene expression
S Kumar, T Mohapatra - Frontiers in cell and developmental biology, 2021 - frontiersin.org
Gene regulation depends on dynamic and reversibly modifiable biological and chemical
information in the epigenome/epitranscriptome. Accumulating evidence suggests that …
information in the epigenome/epitranscriptome. Accumulating evidence suggests that …
Plants' epigenetic mechanisms and abiotic stress
M Miryeganeh - Genes, 2021 - mdpi.com
Plants are sessile organisms that need to adapt to constantly changing environmental
conditions. Unpredictable climate change places plants under a variety of abiotic stresses …
conditions. Unpredictable climate change places plants under a variety of abiotic stresses …
Nanopore direct RNA sequencing maps the complexity of Arabidopsis mRNA processing and m6A modification
MT Parker, K Knop, AV Sherwood, NJ Schurch… - Elife, 2020 - elifesciences.org
Understanding genome organization and gene regulation requires insight into RNA
transcription, processing and modification. We adapted nanopore direct RNA sequencing to …
transcription, processing and modification. We adapted nanopore direct RNA sequencing to …
A photoregulatory mechanism of the circadian clock in Arabidopsis
Cryptochromes (CRYs) are photoreceptors that mediate light regulation of the circadian
clock in plants and animals. Here we show that CRYs mediate blue-light regulation of N6 …
clock in plants and animals. Here we show that CRYs mediate blue-light regulation of N6 …
N6‐Methyladenosine mRNA methylation is important for salt stress tolerance in Arabidopsis
J Hu, J Cai, SJ Park, K Lee, Y Li, Y Chen… - The Plant …, 2021 - Wiley Online Library
As the most abundant internal modification of mRNA, N6‐methyladenosine (m6A)
methylation of RNA is emerging as a new layer of epitranscriptomic gene regulation in …
methylation of RNA is emerging as a new layer of epitranscriptomic gene regulation in …
Light-induced LLPS of the CRY2/SPA1/FIO1 complex regulating mRNA methylation and chlorophyll homeostasis in Arabidopsis
Light regulates chlorophyll homeostasis and photosynthesis via various molecular
mechanisms in plants. The light regulation of transcription and protein stability of nuclear …
mechanisms in plants. The light regulation of transcription and protein stability of nuclear …
[HTML][HTML] Epigenetic modifications of mRNA and DNA in plants
Advances in the detection and mapping of messenger RNA (mRNA) N 6-methyladenosine
(m 6 A) and 5-methylcytosine (m 5 C), and DNA N 6-methyldeoxyadenosine (6mA) …
(m 6 A) and 5-methylcytosine (m 5 C), and DNA N 6-methyldeoxyadenosine (6mA) …
RNA methylation in plants: An overview
RNA methylation is an important post-transcriptional modification that influences gene
regulation. Over 200 different types of RNA modifications have been identified in plants. In …
regulation. Over 200 different types of RNA modifications have been identified in plants. In …
MdMTA‐mediated m6A modification enhances drought tolerance by promoting mRNA stability and translation efficiency of genes involved in lignin deposition and …
N Hou, C Li, J He, Y Liu, S Yu, M Malnoy… - New …, 2022 - Wiley Online Library
Although the N6‐methyladenosine (m6A) modification is the most prevalent RNA
modification in eukaryotes, the global m6A modification landscape and its molecular …
modification in eukaryotes, the global m6A modification landscape and its molecular …
DENA: training an authentic neural network model using Nanopore sequencing data of Arabidopsis transcripts for detection and quantification of N6 …
Abstract Models developed using Nanopore direct RNA sequencing data from in vitro
synthetic RNA with all adenosine replaced by N 6-methyladenosine (m6A) are likely …
synthetic RNA with all adenosine replaced by N 6-methyladenosine (m6A) are likely …