Plant pan-genomes are the new reference
Recent years have seen a surge in plant genome sequencing projects and the comparison
of multiple related individuals. The high degree of genomic variation observed led to the …
of multiple related individuals. The high degree of genomic variation observed led to the …
Patterns and processes of diploidization in land plants
Most land plants are now known to be ancient polyploids that have rediploidized.
Diploidization involves many changes in genome organization that ultimately restore …
Diploidization involves many changes in genome organization that ultimately restore …
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes
We report de novo genome assemblies, transcriptomes, annotations, and methylomes for
the 26 inbreds that serve as the founders for the maize nested association mapping …
the 26 inbreds that serve as the founders for the maize nested association mapping …
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
Oilseed rape (Brassica napus L.) was formed~ 7500 years ago by hybridization between B.
rapa and B. oleracea, followed by chromosome doubling, a process known as …
rapa and B. oleracea, followed by chromosome doubling, a process known as …
[HTML][HTML] Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea
Background Brassica oleracea is a valuable vegetable species that has contributed to
human health and nutrition for hundreds of years and comprises multiple distinct cultivar …
human health and nutrition for hundreds of years and comprises multiple distinct cultivar …
[PDF][PDF] Karyotype stability and unbiased fractionation in the paleo-allotetraploid Cucurbita genomes
The Cucurbita genus contains several economically important species in the Cucurbitaceae
family. Here, we report high-quality genome sequences of C. maxima and C. moschata and …
family. Here, we report high-quality genome sequences of C. maxima and C. moschata and …
Subgenome parallel selection is associated with morphotype diversification and convergent crop domestication in Brassica rapa and Brassica oleracea
F Cheng, R Sun, X Hou, H Zheng, F Zhang, Y Zhang… - Nature …, 2016 - nature.com
Brassica species, including crops such as cabbage, turnip and oilseed, display enormous
phenotypic variation. Brassica genomes have all undergone a whole-genome triplication …
phenotypic variation. Brassica genomes have all undergone a whole-genome triplication …
Doubling down on genomes: polyploidy and crop plants
S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …
species are relatively recent allopolyploids, resulting from interspecific hybridization and …
Genome triplication drove the diversification of Brassica plants
The genus Brassica belongs to the plant family Brassicaceae, which includes many
important crop species that are used as oilseed, condiments, or vegetables throughout the …
important crop species that are used as oilseed, condiments, or vegetables throughout the …
[HTML][HTML] The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure
Camelina sativa is an oilseed with desirable agronomic and oil-quality attributes for a viable
industrial oil platform crop. Here we generate the first chromosome-scale high-quality …
industrial oil platform crop. Here we generate the first chromosome-scale high-quality …