Stochastic community assembly: does it matter in microbial ecology?

J Zhou, D Ning - Microbiology and molecular biology reviews, 2017 - Am Soc Microbiol
Understanding the mechanisms controlling community diversity, functions, succession, and
biogeography is a central, but poorly understood, topic in ecology, particularly in microbial …

Beyond biogeographic patterns: processes shaping the microbial landscape

CA Hanson, JA Fuhrman, MC Horner-Devine… - Nature Reviews …, 2012 - nature.com
Recently, microbiologists have established the existence of biogeographic patterns among a
wide range of microorganisms. The focus of the field is now shifting to identifying the …

Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China

S Jiao, Y Yang, Y Xu, J Zhang, Y Lu - The ISME Journal, 2020 - academic.oup.com
Revealing the linkages between community assembly and species coexistence, which is
crucial for the understanding of ecosystem diversity and functioning, is a fundamental but …

The structure and assembly mechanisms of plastisphere microbial community in natural marine environment

SJ Zhang, YH Zeng, JM Zhu, ZH Cai, J Zhou - Journal of Hazardous …, 2022 - Elsevier
The microbial colonization profiles on microplastics (MPs) in marine environments have
recently sparked global interest. However, many studies have characterized plastisphere …

Soil microbiomes with distinct assemblies through vertical soil profiles drive the cycling of multiple nutrients in reforested ecosystems

S Jiao, W Chen, J Wang, N Du, Q Li, G Wei - Microbiome, 2018 - Springer
Background Soil microbiomes play an important role in the services and functioning of
terrestrial ecosystems. However, little is known of their vertical responses to restoration …

Spatial scale affects the relative role of stochasticity versus determinism in soil bacterial communities in wheat fields across the North China Plain

Y Shi, Y Li, X Xiang, R Sun, T Yang, D He, K Zhang… - Microbiome, 2018 - Springer
Background The relative importance of stochasticity versus determinism in soil bacterial
communities is unclear, as are the possible influences that alter the balance between these …

Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics

WR Harcombe, WJ Riehl, I Dukovski, BR Granger… - Cell reports, 2014 - cell.com
The interspecies exchange of metabolites plays a key role in the spatiotemporal dynamics of
microbial communities. This raises the question of whether ecosystem-level behavior of …

The bacterial biogeography of British soils

RI Griffiths, BC Thomson, P James… - Environmental …, 2011 - Wiley Online Library
Despite recognition of the importance of soil bacteria to terrestrial ecosystem functioning
there is little consensus on the factors regulating belowground biodiversity. Here we present …

Differences in gut microbial composition correlate with regional brain volumes in irritable bowel syndrome

JS Labus, EB Hollister, J Jacobs, K Kirbach… - Microbiome, 2017 - Springer
Background Preclinical and clinical evidence supports the concept of bidirectional brain-gut
microbiome interactions. We aimed to determine if subgroups of irritable bowel syndrome …

Geographic distance and pH drive bacterial distribution in alkaline lake sediments across Tibetan Plateau

J Xiong, Y Liu, X Lin, H Zhang, J Zeng… - Environmental …, 2012 - Wiley Online Library
Continent‐scale biogeography has been extensively studied in soils and marine systems,
but little is known about biogeographical patterns in non‐marine sediments. We used …