Do TUNEL and other apoptosis assays detect cell death in preclinical studies?
R Mirzayans, D Murray - International Journal of Molecular Sciences, 2020 - mdpi.com
The terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling (TUNEL) assay
detects DNA breakage by labeling the free 3ʹ-hydroxyl termini. Given that genomic DNA …
detects DNA breakage by labeling the free 3ʹ-hydroxyl termini. Given that genomic DNA …
[HTML][HTML] PARP7 negatively regulates the type I interferon response in cancer cells and its inhibition triggers antitumor immunity
JM Gozgit, MM Vasbinder, RP Abo, K Kunii… - Cancer Cell, 2021 - cell.com
PARP7 is a monoPARP that catalyzes the transfer of single units of ADP-ribose onto
substrates to change their function. Here, we identify PARP7 as a negative regulator of …
substrates to change their function. Here, we identify PARP7 as a negative regulator of …
Imaging DNA double-strand breaks—are we there yet?
DNA double-strand breaks (DSBs) are fundamental to cell biology, from evolution to the
latest gene-editing technologies. Yet, does an assay exist that truly quantitatively visualizes …
latest gene-editing technologies. Yet, does an assay exist that truly quantitatively visualizes …
Ubiquitinated PCNA drives USP1 synthetic lethality in cancer
A Simoneau, JL Engel, M Bandi, K Lazarides… - Molecular Cancer …, 2023 - AACR
CRISPR Cas9-based screening is a powerful approach for identifying and characterizing
novel drug targets. Here, we elucidate the synthetic lethal mechanism of deubiquitinating …
novel drug targets. Here, we elucidate the synthetic lethal mechanism of deubiquitinating …
Genome-wide detection of DNA double-strand breaks by in-suspension BLISS
BAM Bouwman, F Agostini, S Garnerone, G Petrosino… - Nature protocols, 2020 - nature.com
Abstract sBLISS (in-suspension breaks labeling in situ and sequencing) is a versatile and
widely applicable method for identification of endogenous and induced DNA double-strand …
widely applicable method for identification of endogenous and induced DNA double-strand …
Sequence Preference and Initiator Promiscuity for De Novo DNA Synthesis by Terminal Deoxynucleotidyl Transferase
The untemplated activity of terminal deoxynucleotidyl transferase (TdT) represents its most
appealing feature. Its use is well established in applications aiming for extension of a DNA …
appealing feature. Its use is well established in applications aiming for extension of a DNA …
DNA Double Strand Break and Response Fluorescent Assays: Choices and Interpretation
Accurately characterizing DNA double-stranded breaks (DSBs) and understanding the DNA
damage response (DDR) is crucial for assessing cellular genotoxicity, maintaining genomic …
damage response (DDR) is crucial for assessing cellular genotoxicity, maintaining genomic …
Repair foci as liquid phase separation: evidence and limitations
J Miné-Hattab, S Liu, A Taddei - Genes, 2022 - mdpi.com
In response to DNA double strand breaks (DSB), repair proteins accumulate at damaged
sites, forming membrane-less condensates or “foci”. The formation of these foci and their …
sites, forming membrane-less condensates or “foci”. The formation of these foci and their …
DNA as the main target in radiotherapy—a historical overview from first isolation to anti-tumour immune response
B Frey, K Borgmann, T Jost, B Greve, M Oertel… - Strahlentherapie und …, 2023 - Springer
DNA damage is one of the foremost mechanisms of irradiation at the biological level. After
the first isolation of DNA by Friedrich Miescher in the 19th century, the structure of DNA was …
the first isolation of DNA by Friedrich Miescher in the 19th century, the structure of DNA was …
Inherited C-terminal TREX1 variants disrupt homology-directed repair to cause senescence and DNA damage phenotypes in Drosophila, mice, and humans
SD Chauvin, S Ando, JA Holley, A Sugie… - Nature …, 2024 - nature.com
Age-related microangiopathy, also known as small vessel disease (SVD), causes damage to
the brain, retina, liver, and kidney. Based on the DNA damage theory of aging, we reasoned …
the brain, retina, liver, and kidney. Based on the DNA damage theory of aging, we reasoned …