GlycoEnzOnto: a GlycoEnzyme pathway and molecular function ontology

T Groth, AD Diehl, R Gunawan… - Bioinformatics, 2022 - academic.oup.com
Motivation The 'glycoEnzymes' include a set of proteins having related enzymatic, metabolic,
transport, structural and cofactor functions. Currently, there is no established ontology to …

Bridging glycoinformatics and cheminformatics: integration efforts between GlyCosmos and PubChem

T Cheng, T Ono, M Shiota, I Yamada… - …, 2023 - academic.oup.com
Abstract The GlyCosmos Glycoscience Portal (https://glycosmos. org) and PubChem
(https://pubchem. ncbi. nlm. nih. gov/) are major portals for glycoscience and chemistry …

Ontology in Medicine as a Database Management System

KO Shobowale - Ontology‐Based Information Retrieval for …, 2020 - Wiley Online Library
The advent of the growth of numerous global data in medicine brought data management
complexity; this has necessitated the use of improved tools to further enhance the …

Using Omics to Understand Cancer Glycobiology at a Systems-Level

TS Groth - 2022 - search.proquest.com
Glycosylation is the process whereby complex carbohydrates, known as glycans, are added
to proteins and lipids. Glycosylation is necessary for proper biological functioning. Upon …

[HTML][HTML] GlyCosmos Portal and MIRAGE

KF Aoki-Kinoshita - Glycoforum, 2019 - glycoforum.gr.jp
In this second installment of this series, an overview of the GlyCosmos Portal and the
MIRAGE initiative will be described. The GlyCosmos Glycoscience Portal is a Web portal for …

[PDF][PDF] Bacterial genomes assembly using PacBio long read technologies

S Achaibou, T Cokelaer - keynote talk by Ludovic Orlando, Pierre-Antoine … - hal.science
Even though bacterial genomes are small (as compared to eukaryotes), they may be difficult
to assemble due to their high GC content or large repeated regions. Assembly of such …

[HTML][HTML] Database of pathways and diseases in glycoscience (Glycosmos Pathways, GDGDB, PACDB)

T Ono, K Angata - Glycoforum, 2020 - glycoforum.gr.jp
In this seventh installment of this series, biological pathways involving glycoproteins, glycan-
related genes relevant to disease, and a database on infectious diseases and glycans will …

Data Integration and VISualization (DIVIS): from large heterogeneous datasets to interpretable visualisations in plant science

O Thierry, R Boumaza, J Buitink… - JOBIM …, 2018 - institut-agro-rennes-angers.hal …
The demand by biologists to integrate heterogeneous and large datasets from" omics" and
phenotyping activites is rapidly increasing. However, methods automating this approach are …

[HTML][HTML] 糖鎖合成パスウェイと糖鎖疾患のデータベース(Glycosmos Pathways, GDGDB, PACDB)

小野多美子, 安形清彦 - Glycoforum, 2020 - glycoforum.gr.jp
糖鎖合成パスウェイと糖鎖疾患のデータベース (Glycosmos Pathways, GDGDB, PACDB) ISSN
1349-9416 / CODEN GLYCAX Glycoforum Home | Contact us | Privacy policy ENGLISH …

[HTML][HTML] GlyCosmos ポータルとMIRAGE

木下聖子 - Glycoforum, 2019 - glycoforum.gr.jp
1. 要旨 本シリーズの第 2 回では, GlyCosmos ポータルと MIRAGE 構想の概要について説明し
ます. GlyCosmos Glycoscience Portal は, 糖鎖科学データリソース用のウェブポータルです …