Dynamics and function of DNA methylation in plants

H Zhang, Z Lang, JK Zhu - Nature reviews Molecular cell biology, 2018 - nature.com
DNA methylation is a conserved epigenetic modification that is important for gene regulation
and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental …

[HTML][HTML] Dynamics of DNA methylation and its functions in plant growth and development

S Kumar, T Mohapatra - Frontiers in Plant Science, 2021 - frontiersin.org
Epigenetic modifications in DNA bases and histone proteins play important roles in the
regulation of gene expression and genome stability. Chemical modification of DNA base …

[HTML][HTML] Haplotype-resolved genome assembly provides insights into evolutionary history of the tea plant Camellia sinensis

X Zhang, S Chen, L Shi, D Gong, S Zhang, Q Zhao… - Nature Genetics, 2021 - nature.com
Tea is an important global beverage crop and is largely clonally propagated. Despite
previous studies on the species, its genetic and evolutionary history deserves further …

[HTML][HTML] Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes

S Sun, Y Zhou, J Chen, J Shi, H Zhao, H Zhao… - Nature …, 2018 - nature.com
Maize is an important crop with a high level of genome diversity and heterosis. The genome
sequence of a typical female line, B73, was previously released. Here, we report a de novo …

Cereal endosperms: development and storage product accumulation

J Liu, MW Wu, CM Liu - Annual review of plant biology, 2022 - annualreviews.org
The persistent triploid endosperms of cereal crops are the most important source of human
food and animal feed. The development of cereal endosperms progresses through …

Exploiting induced and natural epigenetic variation for crop improvement

NM Springer, RJ Schmitz - Nature reviews genetics, 2017 - nature.com
Plant breeding has traditionally relied on combining the genetic diversity present within a
species to develop combinations of alleles that provide desired traits. Epigenetic diversity …

Dynamic transcriptome landscape of maize embryo and endosperm development

J Chen, B Zeng, M Zhang, S Xie, G Wang… - Plant …, 2014 - academic.oup.com
Maize (Zea mays) is an excellent cereal model for research on seed development because
of its relatively large size for both embryo and endosperm. Despite the importance of seed in …

Genomic imprinting in plants—revisiting existing models

RA Batista, C Köhler - Genes & development, 2020 - genesdev.cshlp.org
Genomic imprinting is an epigenetic phenomenon leading to parentally biased gene
expression. Throughout the years, extensive efforts have been made to characterize the …

Transposable element influences on gene expression in plants

CD Hirsch, NM Springer - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Transposable elements (TEs) comprise a major portion of many plant genomes and bursts
of TE movements cause novel genomic variation within species. In order to maintain proper …

Parental and Environmental Control of Seed Dormancy in Arabidopsis thaliana

M Iwasaki, S Penfield… - Annual Review of Plant …, 2022 - annualreviews.org
Seed dormancy—the absence of seed germination under favorable germination conditions—
is a plant trait that evolved to enhance seedling survival by avoiding germination under …