Multi-scale modelling and simulation in systems biology
The aim of systems biology is to describe and understand biology at a global scale where
biological functions are recognised as a result of complex mechanisms that happen at …
biological functions are recognised as a result of complex mechanisms that happen at …
The virtual cell—a candidate co-ordinator for 'middle-out'modelling of biological systems
DC Walker, J Southgate - Briefings in bioinformatics, 2009 - academic.oup.com
Understanding the functioning of biological systems depends on tackling complexity
spanning spatial scales from genome to organ to whole organism. The basic unit of life, the …
spanning spatial scales from genome to organ to whole organism. The basic unit of life, the …
Multiscale modelling and simulation: a position paper
A Hoekstra, B Chopard… - … Transactions of the …, 2014 - royalsocietypublishing.org
We argue that, despite the fact that the field of multiscale modelling and simulation has
enjoyed significant success within the past decade, it still holds many open questions that …
enjoyed significant success within the past decade, it still holds many open questions that …
The application of multiscale modelling to the process of development and prevention of stenosis in a stented coronary artery
The inherent complexity of biomedical systems is well recognized; they are multiscale,
multiscience systems, bridging a wide range of temporal and spatial scales. While the …
multiscience systems, bridging a wide range of temporal and spatial scales. While the …
Multi-scale modelling in computational biomedicine
PMA Sloot, AG Hoekstra - Briefings in bioinformatics, 2010 - academic.oup.com
The inherent complexity of biomedical systems is well recognized; they are multi-scale, multi-
science systems, bridging a wide range of temporal and spatial scales. This article reviews …
science systems, bridging a wide range of temporal and spatial scales. This article reviews …
[HTML][HTML] Distributed multiscale computing with MUSCLE 2, the multiscale coupling library and environment
Abstract We present the Multiscale Coupling Library and Environment: MUSCLE 2. This
multiscale component-based execution environment has a simple to use Java, C++, C …
multiscale component-based execution environment has a simple to use Java, C++, C …
Foundations of distributed multiscale computing: Formalization, specification, and analysis
J Borgdorff, JL Falcone, E Lorenz… - Journal of Parallel and …, 2013 - Elsevier
Inherently complex problems from many scientific disciplines require a multiscale modeling
approach. Yet its practical contents remain unclear and inconsistent. Moreover, multiscale …
approach. Yet its practical contents remain unclear and inconsistent. Moreover, multiscale …
Mastering the scales: a survey on the benefits of multiscale computing software
In the last few decades, multiscale modelling has emerged as one of the dominant
modelling paradigms in many areas of science and engineering. Its rise to dominance is …
modelling paradigms in many areas of science and engineering. Its rise to dominance is …
A complex automata approach for in-stent restenosis: two-dimensional multiscale modelling and simulations
A Caiazzo, D Evans, JL Falcone, J Hegewald… - Journal of computational …, 2011 - Elsevier
In-stent restenosis, the maladaptive response of a blood vessel to injury caused by the
deployment of a stent, is a multiscale system involving a large number of biological and …
deployment of a stent, is a multiscale system involving a large number of biological and …
MML: towards a multiscale modeling language
JL Falcone, B Chopard, A Hoekstra - Procedia Computer Science, 2010 - Elsevier
Recent multiscale applications require more and more often the coupling of many sub-
models, usually originating form different fields of science. Therefore, it is increasingly …
models, usually originating form different fields of science. Therefore, it is increasingly …