Computational approaches streamlining drug discovery

AV Sadybekov, V Katritch - Nature, 2023 - nature.com
Computer-aided drug discovery has been around for decades, although the past few years
have seen a tectonic shift towards embracing computational technologies in both academia …

On scientific understanding with artificial intelligence

M Krenn, R Pollice, SY Guo, M Aldeghi… - Nature Reviews …, 2022 - nature.com
An oracle that correctly predicts the outcome of every particle physics experiment, the
products of every possible chemical reaction or the function of every protein would …

Sample efficiency matters: a benchmark for practical molecular optimization

W Gao, T Fu, J Sun, C Coley - Advances in neural …, 2022 - proceedings.neurips.cc
Molecular optimization is a fundamental goal in the chemical sciences and is of central
interest to drug and material design. In recent years, significant progress has been made in …

A review of large language models and autonomous agents in chemistry

MC Ramos, C Collison, AD White - Chemical Science, 2024 - pubs.rsc.org
Large language models (LLMs) have emerged as powerful tools in chemistry, significantly
impacting molecule design, property prediction, and synthesis optimization. This review …

The hitchhiker's guide to deep learning driven generative chemistry

Y Ivanenkov, B Zagribelnyy, A Malyshev… - ACS Medicinal …, 2023 - ACS Publications
This microperspective covers the most recent research outcomes of artificial intelligence (AI)
generated molecular structures from the point of view of the medicinal chemist. The main …

Autonomous, multiproperty-driven molecular discovery: From predictions to measurements and back

BA Koscher, RB Canty, MA McDonald, KP Greenman… - Science, 2023 - science.org
A closed-loop, autonomous molecular discovery platform driven by integrated machine
learning tools was developed to accelerate the design of molecules with desired properties …

Reinvent 4: Modern AI–driven generative molecule design

HH Loeffler, J He, A Tibo, JP Janet, A Voronov… - Journal of …, 2024 - Springer
REINVENT 4 is a modern open-source generative AI framework for the design of small
molecules. The software utilizes recurrent neural networks and transformer architectures to …

[HTML][HTML] Industrializing AI/ML during the end-to-end drug discovery process

J Yoo, TY Kim, IS Joung, SO Song - Current Opinion in Structural Biology, 2023 - Elsevier
Drug discovery aims to select proper targets and drug candidates to address unmet clinical
needs. The end-to-end drug discovery process includes all stages of drug discovery from …

Discovery of antibiotics that selectively kill metabolically dormant bacteria

EJ Zheng, JA Valeri, IW Andrews, A Krishnan… - Cell Chemical …, 2024 - cell.com
There is a need to discover and develop non-toxic antibiotics that are effective against
metabolically dormant bacteria, which underlie chronic infections and promote antibiotic …

What is a minimal working example for a self-driving laboratory?

SG Baird, TD Sparks - Matter, 2022 - cell.com
Self-driving laboratories (SDLs) are the future; however, the capital and expertise required
can be daunting. We introduce the idea of an optimization task for less than 100 USD, a …