CTCF and cohesin in genome folding and transcriptional gene regulation
M Merkenschlager, EP Nora - Annual review of genomics and …, 2016 - annualreviews.org
Genome function, replication, integrity, and propagation rely on the dynamic structural
organization of chromosomes during the cell cycle. Genome folding in interphase provides …
organization of chromosomes during the cell cycle. Genome folding in interphase provides …
Decoding the spermatogenesis program: new insights from transcriptomic analyses
Spermatogenesis is a complex differentiation process coordinated spatiotemporally across
and along seminiferous tubules. Cellular heterogeneity has made it challenging to obtain …
and along seminiferous tubules. Cellular heterogeneity has made it challenging to obtain …
Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization
The molecular mechanisms underlying folding of mammalian chromosomes remain poorly
understood. The transcription factor CTCF is a candidate regulator of chromosomal …
understood. The transcription factor CTCF is a candidate regulator of chromosomal …
A comprehensive roadmap of murine spermatogenesis defined by single-cell RNA-seq
Spermatogenesis requires intricate interactions between the germline and somatic cells.
Within a given cross section of a seminiferous tubule, multiple germ and somatic cell types …
Within a given cross section of a seminiferous tubule, multiple germ and somatic cell types …
Characterizing mutagenic effects of recombination through a sequence-level genetic map
INTRODUCTION Diversity in the sequence of the human genome, arising from
recombinations and mutations, is fundamental to human evolution and human diversity …
recombinations and mutations, is fundamental to human evolution and human diversity …
Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis
Male gametes are generated through a specialised differentiation pathway involving a
series of developmental transitions that are poorly characterised at the molecular level …
series of developmental transitions that are poorly characterised at the molecular level …
Molecular basis of CTCF binding polarity in genome folding
Current models propose that boundaries of mammalian topologically associating domains
(TADs) arise from the ability of the CTCF protein to stop extrusion of chromatin loops by …
(TADs) arise from the ability of the CTCF protein to stop extrusion of chromatin loops by …
High-resolution mapping of chromatin packaging in mouse embryonic stem cells and sperm
Mammalian embryonic stem cells (ESCs) and sperm exhibit unusual chromatin packaging
that plays important roles in cellular function. Here, we extend a recently developed …
that plays important roles in cellular function. Here, we extend a recently developed …
[HTML][HTML] High-throughput single-cell sequencing with linear amplification
Conventional methods for single-cell genome sequencing are limited with respect to
uniformity and throughput. Here, we describe sci-L3, a single-cell sequencing method that …
uniformity and throughput. Here, we describe sci-L3, a single-cell sequencing method that …
DNA methylation regulates discrimination of enhancers from promoters through a H3K4me1-H3K4me3 seesaw mechanism
Background DNA methylation at promoters is largely correlated with inhibition of gene
expression. However, the role of DNA methylation at enhancers is not fully understood …
expression. However, the role of DNA methylation at enhancers is not fully understood …